RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 FAM160A1Q05DH4 1040 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 JAKMIP3Q5VZ66 844 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 SYT10Q6XYQ8 523 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
GCFC2-201ENST00000321027 STAP2Q9UGK3 403 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 SLU7O95391 586 aaKnown RBP17.67■□□□□ 0.42
GCFC2-201ENST00000321027 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
GCFC2-201ENST00000321027 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 A0A1B0GUL7 405 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
GCFC2-201ENST00000321027 CEP152O94986 1710 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 LRMPQ12912 555 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 BMS1Q14692 1282 aaKnown RBP17.66■□□□□ 0.42
GCFC2-201ENST00000321027 MKNK2Q9HBH9 465 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 ZNF75DP51815 510 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 WTAPQ15007 396 aa17.66■□□□□ 0.42
GCFC2-201ENST00000321027 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
GCFC2-201ENST00000321027 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
GCFC2-201ENST00000321027 DNA2P51530 1060 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 ENOX2Q16206 610 aaKnown RBP17.65■□□□□ 0.42
GCFC2-201ENST00000321027 CATIPQ7Z7H3 387 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
GCFC2-201ENST00000321027 CUL4AQ13619 759 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
GCFC2-201ENST00000321027 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.429e-8■■■■□ 21.5
GCFC2-201ENST00000321027 KIF2CQ99661 725 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 CRACR2AQ9BSW2 395 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 EYA2O00167 538 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
GCFC2-201ENST00000321027 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
GCFC2-201ENST00000321027 NR1I2O75469 434 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 RFC4P35249 363 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 SMARCC1Q92922 1105 aaPredicted RBP17.64■□□□□ 0.41
GCFC2-201ENST00000321027 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 RGS12O14924 1447 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
GCFC2-201ENST00000321027 N4BP3O15049 544 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
GCFC2-201ENST00000321027 LMTK2Q8IWU2 1503 aa17.64■□□□□ 0.41
GCFC2-201ENST00000321027 RTN1Q16799 776 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 STX17P56962 302 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
GCFC2-201ENST00000321027 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 C6orf229H3BNL8 230 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 ZNF76P36508 570 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 TERF1P54274 439 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 TXLNBQ8N3L3 684 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
GCFC2-201ENST00000321027 CCDC194A0A1B0GVG4 234 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 CCDC148Q8NFR7 591 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 TAF4BQ92750 862 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 SLC4A4Q9Y6R1 1079 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 ZKSCAN3Q9BRR0 538 aa17.62■□□□□ 0.41
GCFC2-201ENST00000321027 LMTK3Q96Q04 1460 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 DHX58Q96C10 678 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 NLRP3Q96P20 1036 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 CYP7A1P22680 504 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 IQCEQ6IPM2 695 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 PLCD4Q9BRC7 762 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 TLR7Q9NYK1 1049 aaKnown RBP17.61■□□□□ 0.41
GCFC2-201ENST00000321027 INO80Q9ULG1 1556 aaPredicted RBP17.61■□□□□ 0.41
GCFC2-201ENST00000321027 LARGE1O95461 756 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 SPA17Q15506 151 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 HELLSQ9NRZ9 838 aa17.61■□□□□ 0.41
GCFC2-201ENST00000321027 KARSQ15046 597 aaKnown RBP17.61■□□□□ 0.41
GCFC2-201ENST00000321027 B4E1Z4 1266 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 BCL2L12Q9HB09 334 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 BRAPQ7Z569 592 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 ANKRD62A6NC57 917 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 GOLGA6L9A6NEM1 432 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 TSPY2A6NKD2 308 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 CACNA2D4Q7Z3S7 1137 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 ZNF397Q8NF99 534 aaPredicted RBP17.6■□□□□ 0.41
GCFC2-201ENST00000321027 GTF3C6Q969F1 213 aa17.6■□□□□ 0.41
GCFC2-201ENST00000321027 MPHOSPH10O00566 681 aaKnown RBP17.59■□□□□ 0.41
GCFC2-201ENST00000321027 YEATS4O95619 227 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 UBA7P41226 1012 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 TTLL7Q6ZT98 887 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 MCM6Q14566 821 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 SPECC1Q5M775 1068 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 KANK3Q6NY19 840 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 ZNF444Q8N0Y2 327 aaPredicted RBP17.59■□□□□ 0.41
GCFC2-201ENST00000321027 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 GBP3Q9H0R5 595 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 ZFP91Q96JP5 570 aaPredicted RBP17.59■□□□□ 0.41
GCFC2-201ENST00000321027 PYCARDQ9ULZ3 195 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 ERBB3P21860 1342 aa17.59■□□□□ 0.41
GCFC2-201ENST00000321027 ATP5JP18859 108 aa17.58■□□□□ 0.41
GCFC2-201ENST00000321027 ITGA6P23229 1130 aa17.58■□□□□ 0.41
GCFC2-201ENST00000321027 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.41
GCFC2-201ENST00000321027 LLPHQ9BRT6 129 aaKnown RBP17.58■□□□□ 0.41
GCFC2-201ENST00000321027 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms