RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PDE8AO60658 829 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CIAO1O76071 339 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 GYS1P13807 737 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 HOXA10P31260 410 aaPredicted RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CRAMP1Q96RY5 1269 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 TFCP2L1Q9NZI6 479 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 ZC3H4Q9UPT8 1303 aaKnown RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 DOCK2Q92608 1830 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 J3QL48 77 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 GRM8O00222 908 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 NTSR2O95665 410 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 TRIM27P14373 513 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CANXP27824 592 aaKnown RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CTHP32929 405 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 GCKRQ14397 625 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 AGERQ15109 404 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CRY2Q49AN0 593 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 NLRP10Q86W26 655 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 ERC1Q8IUD2 1116 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 SETDB2Q96T68 719 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 BRIP1Q9BX63 1249 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 GPR108Q9NPR9 543 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 GMPR2Q9P2T1 348 aaKnown RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 NOB1Q9ULX3 412 aaKnown RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 MAP3K2Q9Y2U5 619 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 PARP3Q9Y6F1 533 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 ZNF646O15015 1829 aaPredicted RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 PDS5AQ29RF7 1337 aaKnown RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 LTBP3Q9NS15 1303 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 IRF6O14896 467 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 RAB11FIP3O75154 756 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 ALDH1A1P00352 501 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 NEFLP07196 543 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CSF1RP07333 972 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 BMP1P13497 986 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 VEGFBP49765 207 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CASP7P55210 303 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 TRIM32Q13049 653 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 HDAC1Q13547 482 aaPredicted RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 ZNF827Q17R98 1081 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 CDC5LQ99459 802 aaKnown RBP4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 ECM29Q5VYK3 1845 aa4.11□□□□□ -1.75
SCAMP1-201ENST00000320280 POLRMTO00411 1230 aaKnown RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 A1BGP04217 495 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 GNAI2P04899 355 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 NDUFV2P19404 249 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 C15orf52Q6ZUT6 534 aaKnown RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 MYH7P12883 1935 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 CACNA1SQ13698 1873 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 AOX1Q06278 1338 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 PI4KAP2A4QPH2 592 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 EIF2S2P20042 333 aaKnown RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 ALDH1B1P30837 517 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 CCDC152Q4G0S7 254 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 COL23A1Q86Y22 540 aaPredicted RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 PI4KAP1Q8N8J0 262 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 GCC1Q96CN9 775 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 REPIN1Q9BWE0 567 aaKnown RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 MIS18AQ9NYP9 233 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 RFX7Q2KHR2 1363 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 CCDC88AQ3V6T2 1871 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 UBTFL1P0CB47 393 aaPredicted RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 MAP2K5Q13163 448 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 IL27Q8NEV9 243 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 MRGPRX2Q96LB1 330 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 SPON1Q9HCB6 807 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 ZBTB40Q9NUA8 1239 aa4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 NOP58Q9Y2X3 529 aaKnown RBP4.1□□□□□ -1.75
SCAMP1-201ENST00000320280 TIAM2Q8IVF5 1701 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 AK9Q5TCS8 1911 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 ZBTB7BO15156 539 aaPredicted RBP4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 NPR1P16066 1061 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 ANKRD44Q8N8A2 993 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 CNBD1Q8NA66 436 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 EHBP1Q8NDI1 1231 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 SUPT20HQ8NEM7 779 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 CNKSR1Q969H4 720 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 RBM17Q96I25 401 aaKnown RBP4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 USB1Q9BQ65 265 aaKnown RBP4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 GDF9O60383 454 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 BBOX1O75936 387 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 IGKV5-2P06315 115 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 FDX1P10109 184 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 ANKRD2Q9GZV1 360 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 COPRSQ9NQ92 184 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 SNED1Q8TER0 1413 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 MROH5Q6ZUA9 1318 aa4.09□□□□□ -1.75
SCAMP1-201ENST00000320280 CHD4Q14839 1912 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 CTSWP56202 376 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 ATP8B2P98198 1209 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 PROSER3Q2NL68 480 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 USPL1Q5W0Q7 1092 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 TTLL7Q6ZT98 887 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 SSH3Q8TE77 659 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 CLUAP1Q96AJ1 413 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 MASTLQ96GX5 879 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 NLRP3Q96P20 1036 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 MYD88Q99836 296 aa4.09□□□□□ -1.76
SCAMP1-201ENST00000320280 PHAXQ9H814 394 aaKnown RBP4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms