RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 VGLL2Q8N8G2 317 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 HAUS7Q99871 368 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 PRDM10Q9NQV6 1147 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 GOLIM4O00461 696 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 GYS1P13807 737 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 IGHMBP2P38935 993 aaKnown RBP18.78■□□□□ 0.6
USH1C-202ENST00000318024 SNRKQ9NRH2 765 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 ATP6V1DQ9Y5K8 247 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 MYH3P11055 1940 aa18.78■□□□□ 0.6
USH1C-202ENST00000318024 PLSCR1O15162 318 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 RGL2O15211 777 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 FIBPO43427 364 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.6
USH1C-202ENST00000318024 ADRA2BP18089 450 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 ZNF827Q17R98 1081 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 ANKRD7Q92527 254 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 SMC3Q9UQE7 1217 aa18.77■□□□□ 0.6
USH1C-202ENST00000318024 CTIFO43310 598 aaKnown RBP18.77■□□□□ 0.59
USH1C-202ENST00000318024 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.59
USH1C-202ENST00000318024 NMIQ13287 307 aaPredicted RBP18.77■□□□□ 0.59
USH1C-202ENST00000318024 CCDC158Q5M9N0 1113 aa18.77■□□□□ 0.59
USH1C-202ENST00000318024 TTC39AQ5SRH9 613 aa18.77■□□□□ 0.59
USH1C-202ENST00000318024 NLRP3Q96P20 1036 aa18.77■□□□□ 0.59
USH1C-202ENST00000318024 LARP6Q9BRS8 491 aaKnown RBP18.77■□□□□ 0.59
USH1C-202ENST00000318024 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
USH1C-202ENST00000318024 TPM3P06753 285 aa18.76■□□□□ 0.59
USH1C-202ENST00000318024 DNM1Q05193 864 aaKnown RBP18.76■□□□□ 0.59
USH1C-202ENST00000318024 SLC10A5Q5PT55 438 aa18.76■□□□□ 0.59
USH1C-202ENST00000318024 DDX60Q8IY21 1712 aaKnown RBP18.76■□□□□ 0.59
USH1C-202ENST00000318024 SCARF1Q14162 830 aa18.76■□□□□ 0.59
USH1C-202ENST00000318024 SF3B3Q15393 1217 aaKnown RBP18.76■□□□□ 0.59
USH1C-202ENST00000318024 SLFNL1Q499Z3 407 aa18.76■□□□□ 0.59
USH1C-202ENST00000318024 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
USH1C-202ENST00000318024 A0A0D9SFI3 127 aa18.75■□□□□ 0.59
USH1C-202ENST00000318024 CELF1Q92879 486 aaKnown RBP18.75■□□□□ 0.59
USH1C-202ENST00000318024 PAG1Q9NWQ8 432 aa18.75■□□□□ 0.59
USH1C-202ENST00000318024 MROH5Q6ZUA9 1318 aa18.75■□□□□ 0.59
USH1C-202ENST00000318024 CPA1P15085 419 aa18.74■□□□□ 0.59
USH1C-202ENST00000318024 GJB2P29033 226 aa18.74■□□□□ 0.59
USH1C-202ENST00000318024 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
USH1C-202ENST00000318024 TM6SF1Q9BZW5 370 aa18.74■□□□□ 0.59
USH1C-202ENST00000318024 COL4A1P02462 1669 aa18.74■□□□□ 0.59
USH1C-202ENST00000318024 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
USH1C-202ENST00000318024 RIOK3O14730 519 aaKnown RBP18.74■□□□□ 0.59
USH1C-202ENST00000318024 ANKRD18AQ8IVF6 992 aa18.74■□□□□ 0.59
USH1C-202ENST00000318024 CDC5LQ99459 802 aaKnown RBP18.74■□□□□ 0.59
USH1C-202ENST00000318024 CHRNDQ07001 517 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 RUFY2Q8WXA3 655 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 ZSWIM6Q9HCJ5 1215 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 C4AP0C0L4 1744 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 PTH1RQ03431 593 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 PUM3Q15397 648 aaKnown RBP18.73■□□□□ 0.59
USH1C-202ENST00000318024 CNBD1Q8NA66 436 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
USH1C-202ENST00000318024 CASTP20810 708 aaKnown RBP18.72■□□□□ 0.59
USH1C-202ENST00000318024 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
USH1C-202ENST00000318024 CCDC83Q8IWF9 413 aa18.72■□□□□ 0.59
USH1C-202ENST00000318024 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
USH1C-202ENST00000318024 SH2B1Q9NRF2 756 aaPredicted RBP18.72■□□□□ 0.59
USH1C-202ENST00000318024 RTL9Q8NET4 1388 aa18.72■□□□□ 0.59
USH1C-202ENST00000318024 ZAP70P43403 619 aa18.72■□□□□ 0.59
USH1C-202ENST00000318024 PHKA1P46020 1223 aa18.72■□□□□ 0.59
USH1C-202ENST00000318024 LPIN2Q92539 896 aa18.72■□□□□ 0.59
USH1C-202ENST00000318024 ZSCAN31Q96LW9 406 aaPredicted RBP18.72■□□□□ 0.59
USH1C-202ENST00000318024 GTPBP4Q9BZE4 634 aaKnown RBP18.72■□□□□ 0.59
USH1C-202ENST00000318024 HIP1O00291 1037 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 SERPINB2P05120 415 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 FGFR2P21802 821 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 CBX1P83916 185 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 EN1Q05925 392 aaPredicted RBP18.71■□□□□ 0.59
USH1C-202ENST00000318024 PRR5LQ6MZQ0 368 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 TTC6Q86TZ1 520 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 ZNF589Q86UQ0 364 aaPredicted RBP18.71■□□□□ 0.59
USH1C-202ENST00000318024 COL23A1Q86Y22 540 aaPredicted RBP18.71■□□□□ 0.59
USH1C-202ENST00000318024 KBTBD3Q8NAB2 608 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
USH1C-202ENST00000318024 GOLGB1Q14789 3259 aaKnown RBP18.71■□□□□ 0.59
USH1C-202ENST00000318024 ELP1O95163 1332 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 CCDC192P0DO97 292 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 MCAMP43121 646 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 CCDC102BQ68D86 513 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 FAM200AQ8TCP9 573 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 TM4SF1P30408 202 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 ME3Q16798 604 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 CCDC129Q6ZRS4 1044 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 SLC51AQ86UW1 340 aa18.7■□□□□ 0.58
USH1C-202ENST00000318024 CCDC171Q6TFL3 1326 aa18.69■□□□□ 0.58
USH1C-202ENST00000318024 RPS8P62241 208 aaKnown RBP18.69■□□□□ 0.58
USH1C-202ENST00000318024 NECTIN1Q15223 517 aa18.69■□□□□ 0.58
USH1C-202ENST00000318024 EZH2Q15910 746 aaKnown RBP18.69■□□□□ 0.58
USH1C-202ENST00000318024 RBM43Q6ZSC3 357 aaKnown RBP18.69■□□□□ 0.58
USH1C-202ENST00000318024 PDRG1Q9NUG6 133 aa18.69■□□□□ 0.58
USH1C-202ENST00000318024 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
USH1C-202ENST00000318024 MINPP1Q9UNW1 487 aa18.69■□□□□ 0.58
USH1C-202ENST00000318024 TAF1P21675 1872 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms