RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ATP2A3Q93084 1043 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 E7EVH7 732 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
HCFC1-201ENST00000310441 TRERF1Q96PN7 1200 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 MGEA5O60502 916 aa17.4■□□□□ 0.38
HCFC1-201ENST00000310441 SDCCAG8Q86SQ7 713 aaPredicted RBP17.4■□□□□ 0.38
HCFC1-201ENST00000310441 ZNF644Q9H582 1327 aaPredicted RBP17.39■□□□□ 0.38
HCFC1-201ENST00000310441 ERCC5P28715 1186 aaPredicted RBP17.39■□□□□ 0.38
HCFC1-201ENST00000310441 ITIH3Q06033 890 aa17.39■□□□□ 0.38
HCFC1-201ENST00000310441 OGFRQ9NZT2 677 aa17.39■□□□□ 0.38
HCFC1-201ENST00000310441 STX8Q9UNK0 236 aa17.39■□□□□ 0.38
HCFC1-201ENST00000310441 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 KCNK9Q9NPC2 374 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
HCFC1-201ENST00000310441 KRT2P35908 639 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 LGSNQ5TDP6 509 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 IFT20Q8IY31 132 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 MCUR1Q96AQ8 359 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
HCFC1-201ENST00000310441 ALG1Q9BT22 464 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 HAUS8Q9BT25 410 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 RAD50Q92878 1312 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 AFAP1L1Q8TED9 768 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 UBLCP1Q8WVY7 318 aaPredicted RBP17.39■□□□□ 0.37
HCFC1-201ENST00000310441 TBC1D32Q96NH3 1257 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 TRIM75PA6NK02 468 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 RUFY4Q6ZNE9 571 aa17.39■□□□□ 0.37
HCFC1-201ENST00000310441 RBM28Q9NW13 759 aaKnown RBP17.39■□□□□ 0.37
HCFC1-201ENST00000310441 BUB1BO60566 1050 aaPredicted RBP17.38■□□□□ 0.37
HCFC1-201ENST00000310441 STX10O60499 249 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 RRP36Q96EU6 259 aaKnown RBP17.38■□□□□ 0.37
HCFC1-201ENST00000310441 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 AGTPBP1Q9UPW5 1226 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
HCFC1-201ENST00000310441 RNF168Q8IYW5 571 aaPredicted RBP17.38■□□□□ 0.37
HCFC1-201ENST00000310441 GLT8D2Q9H1C3 349 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 MMRN2Q9H8L6 949 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 FLIIQ13045 1269 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 KIFC2Q96AC6 838 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 HAUS7Q99871 368 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 ASXL1Q8IXJ9 1541 aa17.38■□□□□ 0.37
HCFC1-201ENST00000310441 RBM26Q5T8P6 1007 aaKnown RBP17.37■□□□□ 0.37
HCFC1-201ENST00000310441 GKAP1Q5VSY0 366 aaPredicted RBP17.37■□□□□ 0.37
HCFC1-201ENST00000310441 TAF12Q16514 161 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 EPB41P11171 864 aaKnown RBP17.37■□□□□ 0.37
HCFC1-201ENST00000310441 HSPA1LP34931 641 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 SMTNP53814 917 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 WDR44Q5JSH3 913 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 ZKSCAN5Q9Y2L8 839 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 IGF1RP08069 1367 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 NAPAP54920 295 aa17.37■□□□□ 0.37
HCFC1-201ENST00000310441 HEATR3Q7Z4Q2 680 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 OGFOD1Q8N543 542 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 AFMP43652 599 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.36■□□□□ 0.37
HCFC1-201ENST00000310441 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
HCFC1-201ENST00000310441 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 TSKSQ9UJT2 592 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 LIN9Q5TKA1 542 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 SMARCC2Q8TAQ2 1214 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
HCFC1-201ENST00000310441 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 ZBTB17Q13105 803 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 CUL4BQ13620 913 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 CERS3Q8IU89 383 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 CDAN1Q8IWY9 1227 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 GOLGA6CA6NDK9 693 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 GOLGA6BA6NDN3 693 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 GOLGA6DP0CG33 693 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 RSPH3Q86UC2 560 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 GOLGA6AQ9NYA3 693 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
HCFC1-201ENST00000310441 CA8P35219 290 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 CCDC25Q86WR0 208 aa17.36■□□□□ 0.37
HCFC1-201ENST00000310441 SEPT14Q6ZU15 432 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 IFT81Q8WYA0 676 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 C6orf229H3BNL8 230 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 PTGS1P23219 599 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 NESP48681 1621 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 NUTM2BA6NNL0 878 aaPredicted RBP17.35■□□□□ 0.37
HCFC1-201ENST00000310441 NUTM2EB1AL46 878 aaPredicted RBP17.35■□□□□ 0.37
HCFC1-201ENST00000310441 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 CCDC65Q8IXS2 484 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 PRG4Q92954 1404 aaPredicted RBP17.35■□□□□ 0.37
HCFC1-201ENST00000310441 MTMR3Q13615 1198 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 SPTLC2O15270 562 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 CCDC38Q502W7 563 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 SYCE1Q8N0S2 351 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 IQUBQ8NA54 791 aa17.35■□□□□ 0.37
HCFC1-201ENST00000310441 SMARCA5O60264 1052 aaPredicted RBP17.34■□□□□ 0.37
HCFC1-201ENST00000310441 TERF1P54274 439 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 LDHAL6AQ6ZMR3 332 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 MCM10Q7L590 875 aa17.34■□□□□ 0.37
HCFC1-201ENST00000310441 ZFP91Q96JP5 570 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms