RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 PPP4R3BQ5MIZ7 849 aa11.31□□□□□ -0.6
TMOD3-201ENST00000308580 ZNF804AQ7Z570 1209 aa11.31□□□□□ -0.6
TMOD3-201ENST00000308580 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
TMOD3-201ENST00000308580 NYXQ9GZU5 481 aa11.31□□□□□ -0.6
TMOD3-201ENST00000308580 RTCBQ9Y3I0 505 aaKnown RBP11.31□□□□□ -0.6
TMOD3-201ENST00000308580 TMCO5BA8MYB1 307 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 CETN1Q12798 172 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 IBSPP21815 317 aaPredicted RBP11.3□□□□□ -0.6
TMOD3-201ENST00000308580 PTGS1P23219 599 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 STX17P56962 302 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 SCLT1Q96NL6 688 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 RTL9Q8NET4 1388 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 PSMA7O14818 248 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
TMOD3-201ENST00000308580 PPP4R3AQ6IN85 833 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 DDX17Q92841 729 aaKnown RBP11.3□□□□□ -0.6
TMOD3-201ENST00000308580 JADE2Q9NQC1 790 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 CALML3P27482 149 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 CTAGE1Q96RT6 745 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 RBSNQ9H1K0 784 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 MACROD2A1Z1Q3 448 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 TBCAO75347 108 aaKnown RBP11.3□□□□□ -0.6
TMOD3-201ENST00000308580 MCM3P25205 808 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 DNAJC10Q8IXB1 793 aa11.3□□□□□ -0.6
TMOD3-201ENST00000308580 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
TMOD3-201ENST00000308580 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
TMOD3-201ENST00000308580 SYCP3Q8IZU3 236 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 ZC3H12CQ9C0D7 883 aaKnown RBP11.29□□□□□ -0.6
TMOD3-201ENST00000308580 APPBP2Q92624 585 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.29□□□□□ -0.62e-8■■□□□ 13.3
TMOD3-201ENST00000308580 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 HLTFQ14527 1009 aaKnown RBP eCLIP11.29□□□□□ -0.6
TMOD3-201ENST00000308580 OTUD7BQ6GQQ9 843 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 SPAG5Q96R06 1193 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 C6orf50Q9HD87 102 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 ERMNQ8TAM6 284 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 CCDC113Q9H0I3 377 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 PBRM1Q86U86 1689 aa11.29□□□□□ -0.6
TMOD3-201ENST00000308580 GPAA1O43292 621 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 KRT2P35908 639 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 EDC3Q96F86 508 aaKnown RBP11.28□□□□□ -0.6
TMOD3-201ENST00000308580 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
TMOD3-201ENST00000308580 STXBP4Q6ZWJ1 553 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 DESP17661 470 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 MCM7P33993 719 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 HSPA4P34932 840 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 TNNI2P48788 182 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 PRPF4BQ13523 1007 aaKnown RBP11.28□□□□□ -0.6
TMOD3-201ENST00000308580 HS1BP3Q53T59 392 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
TMOD3-201ENST00000308580 SSH3Q8TE77 659 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 ANKRD2Q9GZV1 360 aa11.28□□□□□ -0.6
TMOD3-201ENST00000308580 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
TMOD3-201ENST00000308580 POTEB2H3BUK9 544 aa11.27□□□□□ -0.6
TMOD3-201ENST00000308580 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.6
TMOD3-201ENST00000308580 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.6
TMOD3-201ENST00000308580 GNPATO15228 680 aa11.27□□□□□ -0.6
TMOD3-201ENST00000308580 PRDM1O75626 825 aa11.27□□□□□ -0.6
TMOD3-201ENST00000308580 CTNNBL1Q8WYA6 563 aaPredicted RBP11.27□□□□□ -0.6
TMOD3-201ENST00000308580 PLEKHF1Q96S99 279 aa11.27□□□□□ -0.6
TMOD3-201ENST00000308580 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.65e-6■■■□□ 14.7
TMOD3-201ENST00000308580 IFFO1Q0D2I5 559 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 TRMT2AQ8IZ69 625 aaKnown RBP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 V9GYY5 206 aaPredicted RBP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 GSTTP1A0A1W2PQM5 241 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 PDE8AO60658 829 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 CYLC1P35663 651 aaPredicted RBP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 NAA15Q9BXJ9 866 aaKnown RBP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 TAF5LO75529 589 aa11.27□□□□□ -0.61
TMOD3-201ENST00000308580 ANGEL1Q9UNK9 670 aaKnown RBP11.27□□□□□ -0.61
TMOD3-201ENST00000308580 PLCG2P16885 1265 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 PLIN2Q99541 437 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 EHBP1Q8NDI1 1231 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMOD3-201ENST00000308580 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 RIMBP2O15034 1052 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 BMS1Q14692 1282 aaKnown RBP11.26□□□□□ -0.61
TMOD3-201ENST00000308580 RRP36Q96EU6 259 aaKnown RBP11.26□□□□□ -0.61
TMOD3-201ENST00000308580 TMEM87BQ96K49 555 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 GCC2Q8IWJ2 1684 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 KDM6BO15054 1643 aa11.26□□□□□ -0.61
TMOD3-201ENST00000308580 ERVK-7P63135 1459 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms