RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MSL1Q68DK7 614 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 PI16Q6UXB8 463 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 NLRP3Q96P20 1036 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 NRXN2Q9P2S2 1712 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 CASTP20810 708 aaKnown RBP14.23□□□□□ -0.13
TRIM40-205ENST00000307859 RAB3GAP1Q15042 981 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 ADCK5Q3MIX3 580 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
TRIM40-205ENST00000307859 DSCC1Q9BVC3 393 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
TRIM40-205ENST00000307859 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
TRIM40-205ENST00000307859 ANKRD31Q8N7Z5 1873 aa14.22□□□□□ -0.13
TRIM40-205ENST00000307859 CYP2E1P05181 493 aaPredicted RBP14.22□□□□□ -0.13
TRIM40-205ENST00000307859 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
TRIM40-205ENST00000307859 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
TRIM40-205ENST00000307859 APPBP2Q92624 585 aa14.22□□□□□ -0.13
TRIM40-205ENST00000307859 M0R2C6 588 aa14.21□□□□□ -0.13
TRIM40-205ENST00000307859 GYS1P13807 737 aa14.21□□□□□ -0.13
TRIM40-205ENST00000307859 UBE4AQ14139 1066 aa14.21□□□□□ -0.13
TRIM40-205ENST00000307859 RUFY3Q7L099 469 aa14.21□□□□□ -0.13
TRIM40-205ENST00000307859 CELF1Q92879 486 aaKnown RBP14.21□□□□□ -0.13
TRIM40-205ENST00000307859 OSBP2Q969R2 916 aa14.21□□□□□ -0.13
TRIM40-205ENST00000307859 INTS4Q96HW7 963 aaKnown RBP14.21□□□□□ -0.13
TRIM40-205ENST00000307859 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRIM40-205ENST00000307859 CYP46A1Q9Y6A2 500 aa14.21□□□□□ -0.13
TRIM40-205ENST00000307859 CCDC88AQ3V6T2 1871 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 ZNF804BA4D1E1 1349 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 SNAP23O00161 211 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 PSMA5P28066 241 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 ADD2P35612 726 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 AK2P54819 239 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 KRT32Q14532 448 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 PIH1D3Q9NQM4 214 aaKnown RBP14.2□□□□□ -0.14
TRIM40-205ENST00000307859 MINPP1Q9UNW1 487 aa14.2□□□□□ -0.14
TRIM40-205ENST00000307859 HSPD1P10809 573 aaKnown RBP14.19□□□□□ -0.14
TRIM40-205ENST00000307859 TM4SF1P30408 202 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
TRIM40-205ENST00000307859 RASGRF1Q13972 1273 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 ZGPATQ8N5A5 531 aaKnown RBP14.19□□□□□ -0.14
TRIM40-205ENST00000307859 CNBD1Q8NA66 436 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 SPATA5Q8NB90 893 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 NMRK2Q9NPI5 230 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 MAST2Q6P0Q8 1798 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 LRRC37AA6NMS7 1700 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 KIAA1551Q9HCM1 1747 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 CACNA1SQ13698 1873 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 CYP21A2P08686 494 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 CPA1P15085 419 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 UBE3CQ15386 1083 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 ALDH8A1Q9H2A2 487 aaPredicted RBP14.19□□□□□ -0.14
TRIM40-205ENST00000307859 PDRG1Q9NUG6 133 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 LIMCH1Q9UPQ0 1083 aa14.19□□□□□ -0.14
TRIM40-205ENST00000307859 NUCB2P80303 420 aa14.18□□□□□ -0.14
TRIM40-205ENST00000307859 HTRA3P83110 453 aa14.18□□□□□ -0.14
TRIM40-205ENST00000307859 WASHC4Q2M389 1173 aa14.18□□□□□ -0.14
TRIM40-205ENST00000307859 PRR5LQ6MZQ0 368 aa14.18□□□□□ -0.14
TRIM40-205ENST00000307859 BLOC1S2Q6QNY1 142 aa14.18□□□□□ -0.14
TRIM40-205ENST00000307859 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
TRIM40-205ENST00000307859 CCDC24Q8N4L8 307 aa14.18□□□□□ -0.14
TRIM40-205ENST00000307859 TNPO1Q92973 898 aaKnown RBP14.18□□□□□ -0.14
TRIM40-205ENST00000307859 TCRBV5S4A2TA0A5A2 114 aa14.17□□□□□ -0.14
TRIM40-205ENST00000307859 FOXP2O15409 715 aa14.17□□□□□ -0.14
TRIM40-205ENST00000307859 RPS6KB1P23443 525 aa14.17□□□□□ -0.14
TRIM40-205ENST00000307859 BCAMP50895 628 aa14.17□□□□□ -0.14
TRIM40-205ENST00000307859 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
TRIM40-205ENST00000307859 COL1A1P02452 1464 aaPredicted RBP14.17□□□□□ -0.14
TRIM40-205ENST00000307859 C10orf71Q711Q0 1435 aa14.17□□□□□ -0.14
TRIM40-205ENST00000307859 NPHP1O15259 732 aa14.16□□□□□ -0.14
TRIM40-205ENST00000307859 PDE6AP16499 860 aa14.16□□□□□ -0.14
TRIM40-205ENST00000307859 MCM4P33991 863 aa14.16□□□□□ -0.14
TRIM40-205ENST00000307859 SLC9C2Q5TAH2 1124 aa14.16□□□□□ -0.14
TRIM40-205ENST00000307859 CLEC17AQ6ZS10 378 aa14.16□□□□□ -0.14
TRIM40-205ENST00000307859 ZSCAN31Q96LW9 406 aaPredicted RBP14.16□□□□□ -0.14
TRIM40-205ENST00000307859 PUS7LQ9H0K6 701 aaKnown RBP14.16□□□□□ -0.14
TRIM40-205ENST00000307859 LTBP1Q14766 1721 aa14.16□□□□□ -0.14
TRIM40-205ENST00000307859 ZBTB22O15209 634 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 GPAA1O43292 621 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 IDH1O75874 414 aaKnown RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 SERPINB2P05120 415 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 HSPA1AP0DMV8 641 aaKnown RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 HSPA1BP0DMV9 641 aaKnown RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 GRAPQ13588 217 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 COL9A3Q14050 684 aaPredicted RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 CRY2Q49AN0 593 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 GRAPLQ8TC17 118 aaPredicted RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 SH2B1Q9NRF2 756 aaPredicted RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 ZNF532Q9HCE3 1301 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 ST5P78524 1137 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 DDR1Q08345 913 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 ANKRD1Q15327 319 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 NEK1Q96PY6 1258 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 GNL3LQ9NVN8 582 aaKnown RBP14.15□□□□□ -0.14
TRIM40-205ENST00000307859 CTNNA3Q9UI47 895 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 TCHHQ07283 1943 aa14.15□□□□□ -0.14
TRIM40-205ENST00000307859 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
TRIM40-205ENST00000307859 LARGE1O95461 756 aa14.14□□□□□ -0.15
TRIM40-205ENST00000307859 COL11A2P13942 1736 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms