RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 TPM4P67936 248 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 RNF20Q5VTR2 975 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 AOX1Q06278 1338 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 IRX3P78415 501 aaPredicted RBP20.79■□□□□ 0.92
RETREG1-201ENST00000306320 MTX1Q13505 466 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 IQCB1Q15051 598 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 E4F1Q66K89 784 aaPredicted RBP20.79■□□□□ 0.92
RETREG1-201ENST00000306320 NYAP1Q6ZVC0 841 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 FAM89AQ96GI7 184 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 PLEKHA4Q9H4M7 779 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 EVCP57679 992 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 Q6ZUG5 572 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 ANO10Q9NW15 660 aa20.79■□□□□ 0.92
RETREG1-201ENST00000306320 SERPINC1P01008 464 aa20.78■□□□□ 0.92
RETREG1-201ENST00000306320 HAND2P61296 217 aa20.78■□□□□ 0.92
RETREG1-201ENST00000306320 GPS2Q13227 327 aa20.78■□□□□ 0.92
RETREG1-201ENST00000306320 ZSCAN26Q16670 478 aa20.78■□□□□ 0.92
RETREG1-201ENST00000306320 ZCRB1Q8TBF4 217 aaKnown RBP20.78■□□□□ 0.92
RETREG1-201ENST00000306320 RGPD5Q99666 1765 aa20.78■□□□□ 0.92
RETREG1-201ENST00000306320 CFAP100Q494V2 611 aa20.77■□□□□ 0.92
RETREG1-201ENST00000306320 USP28Q96RU2 1077 aa20.77■□□□□ 0.92
RETREG1-201ENST00000306320 CFAP45Q9UL16 551 aa20.77■□□□□ 0.92
RETREG1-201ENST00000306320 DPCR1Q3MIW9 517 aa20.77■□□□□ 0.92
RETREG1-201ENST00000306320 PI16Q6UXB8 463 aa20.77■□□□□ 0.92
RETREG1-201ENST00000306320 CHD2O14647 1828 aaKnown RBP20.76■□□□□ 0.91
RETREG1-201ENST00000306320 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.76■□□□□ 0.91
RETREG1-201ENST00000306320 LRRC37A3O60309 1634 aa20.76■□□□□ 0.91
RETREG1-201ENST00000306320 RASSF4Q9H2L5 321 aa20.76■□□□□ 0.91
RETREG1-201ENST00000306320 NEMFO60524 1076 aa20.75■□□□□ 0.91
RETREG1-201ENST00000306320 GNG11P61952 73 aa20.75■□□□□ 0.91
RETREG1-201ENST00000306320 NAT10Q9H0A0 1025 aaKnown RBP20.75■□□□□ 0.91
RETREG1-201ENST00000306320 RNF216Q9NWF9 866 aaPredicted RBP20.75■□□□□ 0.91
RETREG1-201ENST00000306320 KARSQ15046 597 aaKnown RBP20.75■□□□□ 0.91
RETREG1-201ENST00000306320 CADPS2Q86UW7 1296 aa20.75■□□□□ 0.91
RETREG1-201ENST00000306320 MRFAP1L1Q96HT8 127 aa20.75■□□□□ 0.91
RETREG1-201ENST00000306320 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
RETREG1-201ENST00000306320 ATP1A3P13637 1013 aa20.74■□□□□ 0.91
RETREG1-201ENST00000306320 DHX40Q8IX18 779 aaKnown RBP20.74■□□□□ 0.91
RETREG1-201ENST00000306320 GPATCH11Q8N954 259 aa20.74■□□□□ 0.91
RETREG1-201ENST00000306320 MAP4K1Q92918 833 aa20.74■□□□□ 0.91
RETREG1-201ENST00000306320 PXDNLA1KZ92 1463 aa20.74■□□□□ 0.91
RETREG1-201ENST00000306320 SMC1AQ14683 1233 aaKnown RBP20.74■□□□□ 0.91
RETREG1-201ENST00000306320 ARMCX5Q6P1M9 558 aa20.74■□□□□ 0.91
RETREG1-201ENST00000306320 RPS6KB1P23443 525 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 APOBRQ0VD83 1088 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 TOB2Q14106 344 aaPredicted RBP20.73■□□□□ 0.91
RETREG1-201ENST00000306320 TAF7LQ5H9L4 462 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 BRINP3Q76B58 766 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 GPHNQ9NQX3 736 aaPredicted RBP20.73■□□□□ 0.91
RETREG1-201ENST00000306320 STK38Q15208 465 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 CREBRFQ8IUR6 639 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 VPS18Q9P253 973 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 HDAC5Q9UQL6 1122 aa20.73■□□□□ 0.91
RETREG1-201ENST00000306320 PUF60Q9UHX1 559 aaKnown RBP20.73■□□□□ 0.91
RETREG1-201ENST00000306320 TAF5LO75529 589 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 ADORA1P30542 326 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 RFX5P48382 616 aaPredicted RBP20.72■□□□□ 0.91
RETREG1-201ENST00000306320 WASHC4Q2M389 1173 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 COL15A1P39059 1388 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 ELP1O95163 1332 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 WWC2Q6AWC2 1192 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 GJB4Q9NTQ9 266 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 SNAP23O00161 211 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 LRP10Q7Z4F1 713 aa20.72■□□□□ 0.91
RETREG1-201ENST00000306320 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
RETREG1-201ENST00000306320 ZNF335Q9H4Z2 1342 aaPredicted RBP20.71■□□□□ 0.91
RETREG1-201ENST00000306320 ANKRD1Q15327 319 aa20.71■□□□□ 0.91
RETREG1-201ENST00000306320 DNAJC10Q8IXB1 793 aa20.71■□□□□ 0.91
RETREG1-201ENST00000306320 MYO1CO00159 1063 aa20.71■□□□□ 0.91
RETREG1-201ENST00000306320 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
RETREG1-201ENST00000306320 GSDMDP57764 484 aa20.71■□□□□ 0.91
RETREG1-201ENST00000306320 RABEP2Q9H5N1 569 aa20.71■□□□□ 0.91
RETREG1-201ENST00000306320 ORC3Q9UBD5 711 aaPredicted RBP20.71■□□□□ 0.91
RETREG1-201ENST00000306320 GOLGB1Q14789 3259 aaKnown RBP20.71■□□□□ 0.91
RETREG1-201ENST00000306320 CYP21A2P08686 494 aa20.7■□□□□ 0.9
RETREG1-201ENST00000306320 TXLNBQ8N3L3 684 aa20.7■□□□□ 0.9
RETREG1-201ENST00000306320 HELBQ8NG08 1087 aaPredicted RBP20.7■□□□□ 0.9
RETREG1-201ENST00000306320 NEK1Q96PY6 1258 aa20.7■□□□□ 0.9
RETREG1-201ENST00000306320 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
RETREG1-201ENST00000306320 DESI2Q9BSY9 194 aa20.7■□□□□ 0.9
RETREG1-201ENST00000306320 SASH3O75995 380 aa20.7■□□□□ 0.9
RETREG1-201ENST00000306320 H2AFXP16104 143 aaPredicted RBP20.7■□□□□ 0.9
RETREG1-201ENST00000306320 PLBD2Q8NHP8 589 aa20.7■□□□□ 0.9
RETREG1-201ENST00000306320 RESTQ13127 1097 aa20.69■□□□□ 0.9
RETREG1-201ENST00000306320 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
RETREG1-201ENST00000306320 GTF2A1P52655 376 aaPredicted RBP20.69■□□□□ 0.9
RETREG1-201ENST00000306320 CCDC102AQ96A19 550 aa20.69■□□□□ 0.9
RETREG1-201ENST00000306320 KIF2AO00139 706 aaPredicted RBP20.68■□□□□ 0.9
RETREG1-201ENST00000306320 NDUFA8P51970 172 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 ETF1P62495 437 aaKnown RBP20.68■□□□□ 0.9
RETREG1-201ENST00000306320 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 DRC1Q96MC2 740 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 ARFGAP3Q9NP61 516 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 IFIT1P09914 478 aaKnown RBP20.68■□□□□ 0.9
RETREG1-201ENST00000306320 LEKR1Q6ZMV7 388 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 CPLX3Q8WVH0 158 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 AK7Q96M32 723 aa20.68■□□□□ 0.9
RETREG1-201ENST00000306320 MED1Q15648 1581 aaPredicted RBP20.68■□□□□ 0.9
RETREG1-201ENST00000306320 A0A1B0GUL7 405 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms