RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 CD99L2Q8TCZ2 262 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 DDX58O95786 925 aaKnown RBP8.37□□□□□ -1.07
ITGB1-201ENST00000302278 EN2P19622 333 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-201ENST00000302278 TEPSINQ96N21 525 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 CD209Q9NNX6 404 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-201ENST00000302278 NEURL1BA8MQ27 555 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
ITGB1-201ENST00000302278 CALD1Q05682 793 aaKnown RBP8.36□□□□□ -1.07
ITGB1-201ENST00000302278 ARHGEF6Q15052 776 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 TTLL5Q6EMB2 1281 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 EFCC1Q9HA90 598 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 ZBTB22O15209 634 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 PPP1R12BO60237 982 aaPredicted RBP8.36□□□□□ -1.07
ITGB1-201ENST00000302278 GNAI1P63096 354 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 SPDYE2Q495Y8 402 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 CLMNQ96JQ2 1002 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
ITGB1-201ENST00000302278 DOCK1Q14185 1865 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
ITGB1-201ENST00000302278 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 KLRK1P26718 216 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 CCDC30Q5VVM6 783 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.35□□□□□ -1.07
ITGB1-201ENST00000302278 DLGAP5Q15398 846 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 GPR153Q6NV75 609 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 MRIQ9BWK5 157 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 SCAF8Q9UPN6 1271 aaKnown RBP8.35□□□□□ -1.07
ITGB1-201ENST00000302278 MAP3K2Q9Y2U5 619 aa8.35□□□□□ -1.07
ITGB1-201ENST00000302278 GTF2A2P52657 109 aa8.34□□□□□ -1.07
ITGB1-201ENST00000302278 BRI3BPQ8WY22 251 aa8.34□□□□□ -1.07
ITGB1-201ENST00000302278 COL2A1P02458 1487 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-201ENST00000302278 PLXNB2O15031 1838 aa8.34□□□□□ -1.07
ITGB1-201ENST00000302278 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
ITGB1-201ENST00000302278 CCDC27Q2M243 656 aa8.34□□□□□ -1.07
ITGB1-201ENST00000302278 FRMPD3Q5JV73 1810 aa8.34□□□□□ -1.07
ITGB1-201ENST00000302278 SPDYE5A6NIY4 337 aa8.34□□□□□ -1.08
ITGB1-201ENST00000302278 HDLBPQ00341 1268 aaKnown RBP8.34□□□□□ -1.08
ITGB1-201ENST00000302278 CHRNDQ07001 517 aa8.34□□□□□ -1.08
ITGB1-201ENST00000302278 TNFAIP1Q13829 316 aa8.34□□□□□ -1.08
ITGB1-201ENST00000302278 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.34□□□□□ -1.08
ITGB1-201ENST00000302278 PTCH2Q9Y6C5 1203 aa8.34□□□□□ -1.08
ITGB1-201ENST00000302278 AOX1Q06278 1338 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-201ENST00000302278 GCKRQ14397 625 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 CFAP100Q494V2 611 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-201ENST00000302278 NBPF12Q5TAG4 269 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-201ENST00000302278 FKBP1CQ5VVH2 108 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 C8orf58Q8NAV2 365 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 OPTNQ96CV9 577 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 TMEM106CQ9BVX2 250 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 MYO1BO43795 1136 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 TLR2O60603 784 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 ITGA6P23229 1130 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 GTF2IP78347 998 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 MKRN3Q13064 507 aaKnown RBP8.33□□□□□ -1.08
ITGB1-201ENST00000302278 PRMT6Q96LA8 375 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-201ENST00000302278 KIF16BQ96L93 1317 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 FOXO4P98177 505 aa8.33□□□□□ -1.08
ITGB1-201ENST00000302278 TDRD7Q8NHU6 1098 aaKnown RBP8.33□□□□□ -1.08
ITGB1-201ENST00000302278 MAST2Q6P0Q8 1798 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 IL16Q14005 1332 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 H0YGN5 161 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 LACTBP83111 547 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-201ENST00000302278 ZNF804AQ7Z570 1209 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 SLC9C1Q4G0N8 1177 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 C17orf99Q6UX52 265 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 HELBQ8NG08 1087 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-201ENST00000302278 ZNF70Q9UC06 446 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-201ENST00000302278 ADAMTS8Q9UP79 889 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 BRCA2P51587 3418 aa8.32□□□□□ -1.08
ITGB1-201ENST00000302278 RASA3Q14644 834 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 PCDHAC2Q9Y5I4 1007 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 SNCAIPQ9Y6H5 919 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 MKI67P46013 3256 aaKnown RBP8.31□□□□□ -1.08
ITGB1-201ENST00000302278 DDX60LQ5H9U9 1706 aaKnown RBP8.31□□□□□ -1.08
ITGB1-201ENST00000302278 PI4KAP2A4QPH2 592 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 GJA8P48165 433 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 NEXNQ0ZGT2 675 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 PPIL2Q13356 520 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 MOGSQ13724 837 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 VGLL4Q14135 290 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 FAM83AQ86UY5 434 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 FAM43AQ8N2R8 423 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 PI4KAP1Q8N8J0 262 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 FZD1Q9UP38 647 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 ANKRD23Q86SG2 305 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 ZNF112Q9UJU3 913 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 KCNH4Q9UQ05 1017 aa8.31□□□□□ -1.08
ITGB1-201ENST00000302278 CETPP11597 493 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 NOL9Q5SY16 702 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms