RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PHF14O94880 888 aa14.34□□□□□ -0.11
TPM3-202ENST00000302206 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
TPM3-202ENST00000302206 RPS8P62241 208 aaKnown RBP14.34□□□□□ -0.11
TPM3-202ENST00000302206 UBE3CQ15386 1083 aa14.34□□□□□ -0.11
TPM3-202ENST00000302206 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
TPM3-202ENST00000302206 SEC62Q99442 399 aaKnown RBP14.34□□□□□ -0.11
TPM3-202ENST00000302206 ANKRD2Q9GZV1 360 aa14.34□□□□□ -0.11
TPM3-202ENST00000302206 LIMCH1Q9UPQ0 1083 aa14.34□□□□□ -0.11
TPM3-202ENST00000302206 DOCK2Q92608 1830 aa14.34□□□□□ -0.11
TPM3-202ENST00000302206 COL4A1P02462 1669 aa14.33□□□□□ -0.11
TPM3-202ENST00000302206 FRAT2O75474 233 aaPredicted RBP14.33□□□□□ -0.12
TPM3-202ENST00000302206 CYP2E1P05181 493 aaPredicted RBP14.33□□□□□ -0.12
TPM3-202ENST00000302206 GYS1P13807 737 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 TM4SF1P30408 202 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 ADD2P35612 726 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 ANKRD1Q15327 319 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 ADCK5Q3MIX3 580 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 CCDC129Q6ZRS4 1044 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 CLEC17AQ6ZS10 378 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 COL23A1Q86Y22 540 aaPredicted RBP14.33□□□□□ -0.12
TPM3-202ENST00000302206 SPATA5Q8NB90 893 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 PDRG1Q9NUG6 133 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 MINPP1Q9UNW1 487 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 ZNF804BA4D1E1 1349 aa14.33□□□□□ -0.12
TPM3-202ENST00000302206 M0R2C6 588 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 APLP1P51693 650 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 AK2P54819 239 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 BLOC1S2Q6QNY1 142 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 CNBD1Q8NA66 436 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 SH2B1Q9NRF2 756 aaPredicted RBP14.32□□□□□ -0.12
TPM3-202ENST00000302206 GNL3LQ9NVN8 582 aaKnown RBP14.32□□□□□ -0.12
TPM3-202ENST00000302206 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
TPM3-202ENST00000302206 TNRC6CQ9HCJ0 1690 aaKnown RBP14.32□□□□□ -0.12
TPM3-202ENST00000302206 SEMA3EO15041 775 aa14.31□□□□□ -0.12
TPM3-202ENST00000302206 CHGBP05060 677 aa14.31□□□□□ -0.12
TPM3-202ENST00000302206 HMGB1P09429 215 aaKnown RBP14.31□□□□□ -0.12
TPM3-202ENST00000302206 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
TPM3-202ENST00000302206 PTMSP20962 102 aa14.31□□□□□ -0.12
TPM3-202ENST00000302206 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
TPM3-202ENST00000302206 PI16Q6UXB8 463 aa14.31□□□□□ -0.12
TPM3-202ENST00000302206 FLAD1Q8NFF5 587 aa14.31□□□□□ -0.12
TPM3-202ENST00000302206 CELF1Q92879 486 aaKnown RBP14.31□□□□□ -0.12
TPM3-202ENST00000302206 PIH1D3Q9NQM4 214 aaKnown RBP14.31□□□□□ -0.12
TPM3-202ENST00000302206 PDS5AQ29RF7 1337 aaKnown RBP14.31□□□□□ -0.12
TPM3-202ENST00000302206 CYP21A2P08686 494 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 MCM4P33991 863 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 MAP3K12Q12852 859 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 RASGRF1Q13972 1273 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 PRR5LQ6MZQ0 368 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 GBP4Q96PP9 640 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 NEK1Q96PY6 1258 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
TPM3-202ENST00000302206 TCRBV5S4A2TA0A5A2 114 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 NPHP1O15259 732 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 IGSF3O75054 1194 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 PDE6AP16499 860 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 BCAMP50895 628 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 ST5P78524 1137 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 GRAPQ13588 217 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 CAVIN4Q5BKX8 364 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 SLC9C2Q5TAH2 1124 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
TPM3-202ENST00000302206 ZGPATQ8N5A5 531 aaKnown RBP14.29□□□□□ -0.12
TPM3-202ENST00000302206 GRAPLQ8TC17 118 aaPredicted RBP14.29□□□□□ -0.12
TPM3-202ENST00000302206 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
TPM3-202ENST00000302206 KIF3CO14782 793 aa14.28□□□□□ -0.12
TPM3-202ENST00000302206 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
TPM3-202ENST00000302206 SERPINB2P05120 415 aa14.28□□□□□ -0.12
TPM3-202ENST00000302206 SLFNL1Q499Z3 407 aa14.28□□□□□ -0.12
TPM3-202ENST00000302206 CRY2Q49AN0 593 aa14.28□□□□□ -0.12
TPM3-202ENST00000302206 TMED8Q6PL24 325 aaPredicted RBP14.28□□□□□ -0.12
TPM3-202ENST00000302206 PUS7LQ9H0K6 701 aaKnown RBP14.28□□□□□ -0.12
TPM3-202ENST00000302206 DENND2AQ9ULE3 1009 aa14.28□□□□□ -0.12
TPM3-202ENST00000302206 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.28□□□□□ -0.12
TPM3-202ENST00000302206 TAF1P21675 1872 aa14.27□□□□□ -0.12
TPM3-202ENST00000302206 ZNF532Q9HCE3 1301 aa14.27□□□□□ -0.12
TPM3-202ENST00000302206 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.13
TPM3-202ENST00000302206 SNAP23O00161 211 aa14.27□□□□□ -0.13
TPM3-202ENST00000302206 GPAA1O43292 621 aa14.27□□□□□ -0.13
TPM3-202ENST00000302206 IDH1O75874 414 aaKnown RBP14.27□□□□□ -0.13
TPM3-202ENST00000302206 ALX1Q15699 326 aa14.27□□□□□ -0.13
TPM3-202ENST00000302206 LEMD3Q9Y2U8 911 aa14.27□□□□□ -0.13
TPM3-202ENST00000302206 NRXN2Q9P2S2 1712 aa14.27□□□□□ -0.13
TPM3-202ENST00000302206 POLRMTO00411 1230 aaKnown RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 FOXP2O15409 715 aa14.26□□□□□ -0.13
TPM3-202ENST00000302206 PDIA4P13667 645 aaKnown RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 CPA1P15085 419 aa14.26□□□□□ -0.13
TPM3-202ENST00000302206 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 IMMTQ16891 758 aaKnown RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 C15orf52Q6ZUT6 534 aaKnown RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 NLGN1Q8N2Q7 840 aa14.26□□□□□ -0.13
TPM3-202ENST00000302206 FBXL16Q8N461 479 aa14.26□□□□□ -0.13
TPM3-202ENST00000302206 RBM17Q96I25 401 aaKnown RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 FAM84BQ96KN1 310 aaPredicted RBP14.26□□□□□ -0.13
TPM3-202ENST00000302206 TAF6LQ9Y6J9 622 aa14.26□□□□□ -0.13
TPM3-202ENST00000302206 IRS2Q9Y4H2 1338 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms