RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 WTAPQ15007 396 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 INF2Q27J81 1249 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 PPFIA2O75334 1257 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 PCK1P35558 622 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 TCHPQ9BT92 498 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
GCN1-201ENST00000300648 UTP11Q9Y3A2 253 aaKnown RBP12.72□□□□□ -0.37
GCN1-201ENST00000300648 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
GCN1-201ENST00000300648 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 KIFAP3Q92845 792 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 KDM5BQ9UGL1 1544 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 VIMP08670 466 aaKnown RBP12.71□□□□□ -0.37
GCN1-201ENST00000300648 CCDC63Q8NA47 563 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 ELP1O95163 1332 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
GCN1-201ENST00000300648 PPP1R7Q15435 360 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 FLIIQ13045 1269 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 HS2ST1Q7LGA3 356 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 CCDC144CPQ8IYA2 1237 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 BICD1Q96G01 975 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
GCN1-201ENST00000300648 NUP58Q9BVL2 599 aa12.71□□□□□ -0.37
GCN1-201ENST00000300648 TRIM75PA6NK02 468 aa12.71□□□□□ -0.38
GCN1-201ENST00000300648 CCDC186Q7Z3E2 898 aa12.71□□□□□ -0.38
GCN1-201ENST00000300648 TRERF1Q96PN7 1200 aa12.71□□□□□ -0.38
GCN1-201ENST00000300648 SPTLC2O15270 562 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
GCN1-201ENST00000300648 RTN1Q16799 776 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 UHRF1BP1Q6BDS2 1440 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 NUTM2GQ5VZR2 741 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 GOLGA6CA6NDK9 693 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 ZEB2O60315 1214 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 GOLGA6DP0CG33 693 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 WHAMMP3Q1A5X7 153 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 GLT8D2Q9H1C3 349 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 NUCKS1Q9H1E3 243 aaKnown RBP12.7□□□□□ -0.38
GCN1-201ENST00000300648 GOLGA6AQ9NYA3 693 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 NDUFAB1O14561 156 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 KLHL34Q8N239 644 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 PPFIA4O75335 1185 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 GNA11P29992 359 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 ZMYM3Q14202 1370 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 ZNF365Q70YC5 407 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 PARP2Q9UGN5 583 aa12.7□□□□□ -0.38
GCN1-201ENST00000300648 AKR1B15C9JRZ8 316 aaPredicted RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 SLC8A1P32418 973 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 USP48Q86UV5 1035 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 THEGQ9P2T0 379 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 SEPT14Q6ZU15 432 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 PPP2R3AQ06190 1150 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 NAPGQ99747 312 aaPredicted RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 SLC26A6Q9BXS9 759 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 CFAP65Q6ZU64 1925 aaKnown RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 CHMP4BP1P59074 171 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 UBXN1Q04323 297 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 SYCE1Q8N0S2 351 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 BAG1Q99933 345 aaPredicted RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 Q9H521 79 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 ABCC5O15440 1437 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 NCBP1Q09161 790 aaKnown RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 LGSNQ5TDP6 509 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 MCUR1Q96AQ8 359 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 MRVI1Q9Y6F6 885 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 TSPY2A6NKD2 308 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 GIMAP6Q6P9H5 292 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 ZSWIM4Q9H7M6 989 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 CCT2P78371 535 aaKnown RBP12.69□□□□□ -0.38
GCN1-201ENST00000300648 FCHSD1Q86WN1 690 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 CABP5Q9NP86 173 aa12.69□□□□□ -0.38
GCN1-201ENST00000300648 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 CETN3O15182 167 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 TBC1D31Q96DN5 1066 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 I3L4J1 428 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 STK10O94804 968 aaKnown RBP12.68□□□□□ -0.38
GCN1-201ENST00000300648 CLNS1AP54105 237 aaKnown RBP12.68□□□□□ -0.38
GCN1-201ENST00000300648 ALG1Q9BT22 464 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 ASIC1P78348 528 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 MYL5Q02045 173 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
GCN1-201ENST00000300648 GBP7Q8N8V2 638 aaPredicted RBP12.68□□□□□ -0.38
GCN1-201ENST00000300648 NCAPGQ9BPX3 1015 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
GCN1-201ENST00000300648 PLCG2P16885 1265 aa12.68□□□□□ -0.38
GCN1-201ENST00000300648 LLPHQ9BRT6 129 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms