RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 ANKRD18AQ8IVF6 992 aa7.93□□□□□ -1.14
TMC1-201ENST00000297784 EVI5LQ96CN4 794 aa7.93□□□□□ -1.14
TMC1-201ENST00000297784 CDC5LQ99459 802 aaKnown RBP7.93□□□□□ -1.14
TMC1-201ENST00000297784 USP26Q9BXU7 913 aa7.93□□□□□ -1.14
TMC1-201ENST00000297784 MYH7P12883 1935 aa7.93□□□□□ -1.14
TMC1-201ENST00000297784 KLRK1P26718 216 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 MCAMP43121 646 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 CCDC125Q86Z20 511 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 CNTROBQ8N137 903 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 LPIN2Q92539 896 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 DOCK2Q92608 1830 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 HOXA10P31260 410 aaPredicted RBP7.92□□□□□ -1.14
TMC1-201ENST00000297784 SF3B2Q13435 895 aaKnown RBP7.92□□□□□ -1.14
TMC1-201ENST00000297784 CCDC102BQ68D86 513 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 GPT2Q8TD30 523 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 GPATCH3Q96I76 525 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 ESYT1Q9BSJ8 1104 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 STK32BQ9NY57 414 aa7.92□□□□□ -1.14
TMC1-201ENST00000297784 PHKA1P46020 1223 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 ST5P78524 1137 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
TMC1-201ENST00000297784 PIBF1Q8WXW3 757 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 ZNF512BQ96KM6 892 aaPredicted RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 MBD3O95983 291 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 SRGNP10124 158 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 BCAMP50895 628 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 GRAPQ13588 217 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 CWC27Q6UX04 472 aaKnown RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 DDX46Q7L014 1031 aaKnown RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 GRAPLQ8TC17 118 aaPredicted RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 FAM227BQ96M60 508 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 BRIP1Q9BX63 1249 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 FOXD4L1Q9NU39 408 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 NPHP1O15259 732 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 SGSM2O43147 1006 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 ARID4AP29374 1257 aaPredicted RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 TXNRD3Q86VQ6 643 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.14
TMC1-201ENST00000297784 DNAJC2Q99543 621 aaKnown RBP7.91□□□□□ -1.14
TMC1-201ENST00000297784 SPTLC3Q9NUV7 552 aa7.91□□□□□ -1.14
TMC1-201ENST00000297784 KIF13BQ9NQT8 1826 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 COL1A1P02452 1464 aaPredicted RBP7.9□□□□□ -1.14
TMC1-201ENST00000297784 UVSSAQ2YD98 709 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 SNRKQ9NRH2 765 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 PAG1Q9NWQ8 432 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
TMC1-201ENST00000297784 SLX4Q8IY92 1834 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 MYH13Q9UKX3 1938 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 A0A0D9SFI3 127 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 GOLIM4O00461 696 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 IFIT1P09914 478 aaKnown RBP7.9□□□□□ -1.14
TMC1-201ENST00000297784 ZAP70P43403 619 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 CCDC158Q5M9N0 1113 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 TMEM63CQ9P1W3 806 aa7.9□□□□□ -1.14
TMC1-201ENST00000297784 ZNF804BA4D1E1 1349 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 DLEC1Q9Y238 1755 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 KIAA1551Q9HCM1 1747 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 OLFM4Q6UX06 510 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 KBTBD3Q8NAB2 608 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 FAM84BQ96KN1 310 aaPredicted RBP7.9□□□□□ -1.15
TMC1-201ENST00000297784 SEC62Q99442 399 aaKnown RBP7.9□□□□□ -1.15
TMC1-201ENST00000297784 KIF3AQ9Y496 699 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 PARP3Q9Y6F1 533 aa7.9□□□□□ -1.15
TMC1-201ENST00000297784 CHD4Q14839 1912 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 DUOX1Q9NRD9 1551 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 GYG1P46976 350 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 FKBP4Q02790 459 aaKnown RBP eCLIP7.89□□□□□ -1.15
TMC1-201ENST00000297784 NMIQ13287 307 aaPredicted RBP7.89□□□□□ -1.15
TMC1-201ENST00000297784 RASGRF1Q13972 1273 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 TTC39AQ5SRH9 613 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 ZNF589Q86UQ0 364 aaPredicted RBP7.89□□□□□ -1.15
TMC1-201ENST00000297784 KLHL34Q8N239 644 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 LSG1Q9H089 658 aaKnown RBP7.89□□□□□ -1.15
TMC1-201ENST00000297784 HMG20BQ9P0W2 317 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 PTH1RQ03431 593 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 UBE4AQ14139 1066 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 RPGRQ92834 1020 aaKnown RBP7.89□□□□□ -1.15
TMC1-201ENST00000297784 CRAMP1Q96RY5 1269 aa7.89□□□□□ -1.15
TMC1-201ENST00000297784 PRPF40AO75400 957 aaKnown RBP7.88□□□□□ -1.15
TMC1-201ENST00000297784 SLC5A1P13866 664 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 GPSM2P81274 684 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 CBX1P83916 185 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 NOLC1Q14978 699 aaKnown RBP eCLIP7.88□□□□□ -1.15
TMC1-201ENST00000297784 FAM184AQ8NB25 1140 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 ANKRD7Q92527 254 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 RBM17Q96I25 401 aaKnown RBP7.88□□□□□ -1.15
TMC1-201ENST00000297784 FEZ1Q99689 392 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 FSD1Q9BTV5 496 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 TMEM51Q9NW97 253 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 RBM27Q9P2N5 1060 aaKnown RBP7.88□□□□□ -1.15
TMC1-201ENST00000297784 MED23Q9ULK4 1368 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 SYCE3A1L190 88 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 CASC1Q6TDU7 716 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 FBXO33Q7Z6M2 555 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 ARID3AQ99856 593 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 TSPY26PQ9H489 355 aa7.88□□□□□ -1.15
TMC1-201ENST00000297784 PIH1D3Q9NQM4 214 aaKnown RBP7.88□□□□□ -1.15
TMC1-201ENST00000297784 POLLQ9UGP5 575 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms