RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NR1I2O75469 434 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 CCT2P78371 535 aaKnown RBP18.23■□□□□ 0.51
UBAP1-201ENST00000297661 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 FBXO38Q6PIJ6 1188 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 HAUS7Q99871 368 aa18.23■□□□□ 0.51
UBAP1-201ENST00000297661 H3BQV1 296 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 CASP7P55210 303 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 SCRN1Q12765 414 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 BRWD3Q6RI45 1802 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 PDIA4P13667 645 aaKnown RBP18.22■□□□□ 0.51
UBAP1-201ENST00000297661 CAPN2P17655 700 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.22■□□□□ 0.51
UBAP1-201ENST00000297661 NCOA5Q9HCD5 579 aaKnown RBP18.22■□□□□ 0.51
UBAP1-201ENST00000297661 SCN11AQ9UI33 1791 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 KCNQ2O43526 872 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 FOXO4P98177 505 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 KRT27Q7Z3Y8 459 aa18.22■□□□□ 0.51
UBAP1-201ENST00000297661 SRCAPQ6ZRS2 3230 aa18.21■□□□□ 0.51
UBAP1-201ENST00000297661 TULP2O00295 520 aa18.21■□□□□ 0.51
UBAP1-201ENST00000297661 ONECUT3O60422 494 aaPredicted RBP18.21■□□□□ 0.51
UBAP1-201ENST00000297661 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
UBAP1-201ENST00000297661 CLIP2Q9UDT6 1046 aa18.21■□□□□ 0.51
UBAP1-201ENST00000297661 ADAMTS7Q9UKP4 1686 aa18.21■□□□□ 0.51
UBAP1-201ENST00000297661 GUCY1B3Q02153 619 aa18.21■□□□□ 0.5
UBAP1-201ENST00000297661 ELF2Q15723 593 aa18.21■□□□□ 0.5
UBAP1-201ENST00000297661 CCDC144BQ3MJ40 725 aa18.21■□□□□ 0.5
UBAP1-201ENST00000297661 TSGA10IPQ3SY00 556 aa18.21■□□□□ 0.5
UBAP1-201ENST00000297661 ATG9AQ7Z3C6 839 aa18.21■□□□□ 0.5
UBAP1-201ENST00000297661 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.5
UBAP1-201ENST00000297661 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.5
UBAP1-201ENST00000297661 U3KPZ7 1027 aaPredicted RBP18.21■□□□□ 0.5
UBAP1-201ENST00000297661 MRC1P22897 1456 aa18.2■□□□□ 0.5
UBAP1-201ENST00000297661 A0A087WWV3 80 aa18.2■□□□□ 0.5
UBAP1-201ENST00000297661 KRT32Q14532 448 aa18.2■□□□□ 0.5
UBAP1-201ENST00000297661 AFDNP55196 1824 aaKnown RBP18.2■□□□□ 0.5
UBAP1-201ENST00000297661 USP27XA6NNY8 438 aa18.2■□□□□ 0.5
UBAP1-201ENST00000297661 KBTBD3Q8NAB2 608 aa18.2■□□□□ 0.5
UBAP1-201ENST00000297661 SCAND2PQ9GZW5 306 aaPredicted RBP18.2■□□□□ 0.5
UBAP1-201ENST00000297661 PAG1Q9NWQ8 432 aa18.2■□□□□ 0.5
UBAP1-201ENST00000297661 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
UBAP1-201ENST00000297661 TTLL5Q6EMB2 1281 aa18.19■□□□□ 0.5
UBAP1-201ENST00000297661 RESTQ13127 1097 aa18.19■□□□□ 0.5
UBAP1-201ENST00000297661 ELP1O95163 1332 aa18.18■□□□□ 0.5
UBAP1-201ENST00000297661 FAM193AP78312 1265 aa18.18■□□□□ 0.5
UBAP1-201ENST00000297661 PTPN14Q15678 1187 aa18.18■□□□□ 0.5
UBAP1-201ENST00000297661 TDRD7Q8NHU6 1098 aaKnown RBP18.18■□□□□ 0.5
UBAP1-201ENST00000297661 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
UBAP1-201ENST00000297661 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
UBAP1-201ENST00000297661 ALDH8A1Q9H2A2 487 aaPredicted RBP18.18■□□□□ 0.5
UBAP1-201ENST00000297661 GPHNQ9NQX3 736 aaPredicted RBP18.18■□□□□ 0.5
UBAP1-201ENST00000297661 TAOK2Q9UL54 1235 aa18.18■□□□□ 0.5
UBAP1-201ENST00000297661 TRERF1Q96PN7 1200 aa18.17■□□□□ 0.5
UBAP1-201ENST00000297661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.57e-8■■■□□ 16.8
UBAP1-201ENST00000297661 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
UBAP1-201ENST00000297661 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
UBAP1-201ENST00000297661 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
UBAP1-201ENST00000297661 NOL10Q9BSC4 688 aaKnown RBP18.17■□□□□ 0.5
UBAP1-201ENST00000297661 ZNF446Q9NWS9 450 aa18.17■□□□□ 0.5
UBAP1-201ENST00000297661 CWC25Q9NXE8 425 aaPredicted RBP18.17■□□□□ 0.5
UBAP1-201ENST00000297661 H7C1W4 665 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 TRIM37O94972 964 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 CTDNEP1O95476 244 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 NYAP1Q6ZVC0 841 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 RAB11FIP4Q86YS3 637 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 CREBRFQ8IUR6 639 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 LRRC8AQ8IWT6 810 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 WNK3Q9BYP7 1800 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 TNS2Q63HR2 1409 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 ZNF165P49910 485 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 HAND2P61296 217 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 ARID5BQ14865 1188 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 ERCC4Q92889 916 aaPredicted RBP18.16■□□□□ 0.5
UBAP1-201ENST00000297661 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 CDCA7Q9BWT1 371 aaPredicted RBP18.16■□□□□ 0.5
UBAP1-201ENST00000297661 THSD7AQ9UPZ6 1657 aa18.16■□□□□ 0.5
UBAP1-201ENST00000297661 PTPDC1A2A3K4 754 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 NPHP1O15259 732 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 CYP2C19P33261 490 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
UBAP1-201ENST00000297661 CLSTN2Q9H4D0 955 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 PARP4Q9UKK3 1724 aaKnown RBP18.15■□□□□ 0.5
UBAP1-201ENST00000297661 ARFGEF2Q9Y6D5 1785 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 A0A1B0GUL7 405 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 IFIT1P09914 478 aaKnown RBP18.15■□□□□ 0.5
UBAP1-201ENST00000297661 HSPD1P10809 573 aaKnown RBP18.15■□□□□ 0.5
UBAP1-201ENST00000297661 DHX32Q7L7V1 743 aaKnown RBP18.15■□□□□ 0.5
UBAP1-201ENST00000297661 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
UBAP1-201ENST00000297661 M0R2C6 588 aa18.14■□□□□ 0.5
UBAP1-201ENST00000297661 HNRNPH2P55795 449 aaKnown RBP18.14■□□□□ 0.5
UBAP1-201ENST00000297661 E7EWF7 191 aa18.14■□□□□ 0.49
UBAP1-201ENST00000297661 SLU7O95391 586 aaKnown RBP18.14■□□□□ 0.49
UBAP1-201ENST00000297661 ADORA1P30542 326 aa18.14■□□□□ 0.49
UBAP1-201ENST00000297661 TRIM34Q9BYJ4 488 aa18.14■□□□□ 0.49
UBAP1-201ENST00000297661 MAST3O60307 1309 aa18.14■□□□□ 0.49
UBAP1-201ENST00000297661 OTUD7BQ6GQQ9 843 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms