RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
SPIDR-201ENST00000297423 PES1O00541 588 aaKnown RBP17.19■□□□□ 0.34
SPIDR-201ENST00000297423 RHOXF2BP0C7M4 288 aa17.19■□□□□ 0.34
SPIDR-201ENST00000297423 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
SPIDR-201ENST00000297423 RHOXF2Q9BQY4 288 aa17.19■□□□□ 0.34
SPIDR-201ENST00000297423 MARF1Q9Y4F3 1742 aaKnown RBP17.19■□□□□ 0.34
SPIDR-201ENST00000297423 E2F4Q16254 413 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 LZTFL1Q9NQ48 299 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 PLA2G4AP47712 749 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 CCZ1BP86790 482 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 CCZ1P86791 482 aaPredicted RBP17.18■□□□□ 0.34
SPIDR-201ENST00000297423 DPCR1Q3MIW9 517 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 ZNF790Q6PG37 636 aa17.18■□□□□ 0.34
SPIDR-201ENST00000297423 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 MRFAP1L1Q96HT8 127 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 EVI5LQ96CN4 794 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 DESI2Q9BSY9 194 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.17■□□□□ 0.34
SPIDR-201ENST00000297423 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 CTAGE5O15320 804 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 DEF6Q9H4E7 631 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 LCMT1Q9UIC8 334 aa17.17■□□□□ 0.34
SPIDR-201ENST00000297423 ETF1P62495 437 aaKnown RBP17.16■□□□□ 0.34
SPIDR-201ENST00000297423 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
SPIDR-201ENST00000297423 WWC2Q6AWC2 1192 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 MYL6BP14649 208 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 JAKMIP3Q5VZ66 844 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 E4F1Q66K89 784 aaPredicted RBP17.16■□□□□ 0.34
SPIDR-201ENST00000297423 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 RIC3Q7Z5B4 369 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 GDAP1L1Q96MZ0 367 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
SPIDR-201ENST00000297423 CYP27B1O15528 508 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
SPIDR-201ENST00000297423 ATP1A3P13637 1013 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 RPS6KB1P23443 525 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 SART3Q15020 963 aaKnown RBP17.15■□□□□ 0.34
SPIDR-201ENST00000297423 PPP2R3AQ06190 1150 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 DDX46Q7L014 1031 aaKnown RBP17.15■□□□□ 0.34
SPIDR-201ENST00000297423 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
SPIDR-201ENST00000297423 PPARDQ03181 441 aa17.14■□□□□ 0.34
SPIDR-201ENST00000297423 ST3GAL1Q11201 340 aa17.14■□□□□ 0.34
SPIDR-201ENST00000297423 HINFPQ9BQA5 517 aa17.14■□□□□ 0.34
SPIDR-201ENST00000297423 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.34
SPIDR-201ENST00000297423 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.34
SPIDR-201ENST00000297423 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
SPIDR-201ENST00000297423 IQCB1Q15051 598 aa17.14■□□□□ 0.33
SPIDR-201ENST00000297423 AXDND1Q5T1B0 1012 aaPredicted RBP17.14■□□□□ 0.33
SPIDR-201ENST00000297423 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.33
SPIDR-201ENST00000297423 RRP15Q9Y3B9 282 aaKnown RBP17.14■□□□□ 0.33
SPIDR-201ENST00000297423 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
SPIDR-201ENST00000297423 CHGBP05060 677 aa17.14■□□□□ 0.33
SPIDR-201ENST00000297423 HAND2P61296 217 aa17.14■□□□□ 0.33
SPIDR-201ENST00000297423 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 CAVIN2O95810 425 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
SPIDR-201ENST00000297423 FANCCQ00597 558 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 KLHL10Q6JEL2 608 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 NYAP1Q6ZVC0 841 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
SPIDR-201ENST00000297423 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 TTC31Q49AM3 519 aaPredicted RBP17.13■□□□□ 0.33
SPIDR-201ENST00000297423 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 UBAP1LF5GYI3 381 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 CCP110O43303 1012 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 ZSCAN12O43309 604 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 ADKP55263 362 aaKnown RBP17.13■□□□□ 0.33
SPIDR-201ENST00000297423 ZNF589Q86UQ0 364 aaPredicted RBP17.13■□□□□ 0.33
SPIDR-201ENST00000297423 MICALL1Q8N3F8 863 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
SPIDR-201ENST00000297423 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
SPIDR-201ENST00000297423 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
SPIDR-201ENST00000297423 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
SPIDR-201ENST00000297423 TLR7Q9NYK1 1049 aaKnown RBP17.12■□□□□ 0.33
SPIDR-201ENST00000297423 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
SPIDR-201ENST00000297423 ZNF496Q96IT1 587 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-201ENST00000297423 ZSCAN16Q9H4T2 348 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-201ENST00000297423 ADAM21Q9UKJ8 722 aa17.12■□□□□ 0.33
SPIDR-201ENST00000297423 MEGF6O75095 1541 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 ERC1Q8IUD2 1116 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 MAP3K2Q9Y2U5 619 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 NDUFA8P51970 172 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 HIP1O00291 1037 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 ELP1O95163 1332 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 RGPD2P0DJD1 1756 aa17.11■□□□□ 0.33
SPIDR-201ENST00000297423 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 MTX1Q13505 466 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 DHX40Q8IX18 779 aaKnown RBP17.1■□□□□ 0.33
SPIDR-201ENST00000297423 PARD6BQ9BYG5 372 aa17.1■□□□□ 0.33
SPIDR-201ENST00000297423 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms