RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ATP2B3Q16720 1220 aa11.71□□□□□ -0.53
TNFRSF11B-201ENST00000297350 FAM173BQ6P4H8 233 aa11.71□□□□□ -0.53
TNFRSF11B-201ENST00000297350 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
TNFRSF11B-201ENST00000297350 DDX11Q96FC9 970 aa11.71□□□□□ -0.53
TNFRSF11B-201ENST00000297350 RTEL1Q9NZ71 1219 aa11.71□□□□□ -0.53
TNFRSF11B-201ENST00000297350 SLIT2O94813 1529 aa11.71□□□□□ -0.53
TNFRSF11B-201ENST00000297350 KINO60870 393 aaKnown RBP11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 NR1I2O75469 434 aa11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 YEATS4O95619 227 aa11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ZNF165P49910 485 aa11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PLA2G4DQ86XP0 818 aa11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 MB21D2Q8IYB1 491 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 KCNG4Q8TDN1 519 aa11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.54
TNFRSF11B-201ENST00000297350 BCL9O00512 1426 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CDKL5O76039 1030 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 UBE3CQ15386 1083 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 WASHC4Q2M389 1173 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CDCA7Q9BWT1 371 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 NAT10Q9H0A0 1025 aaKnown RBP11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 RIPOR2Q9Y4F9 1068 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 RREB1Q92766 1687 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ZNF75DP51815 510 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CTSWP56202 376 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CAMK4Q16566 473 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 DNTTIP2Q5QJE6 756 aaKnown RBP11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 POLR3EQ9NVU0 708 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ANO10Q9NW15 660 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 C4AP0C0L4 1744 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 C4BP0C0L5 1744 aa11.7□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PRC1O43663 620 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TRDNQ13061 729 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 METTL24Q5JXM2 366 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 NLRP10Q86W26 655 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CCAR1Q8IX12 1150 aaKnown RBP11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 MRFAP1L1Q96HT8 127 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TTC12Q9H892 705 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 THRAP3Q9Y2W1 955 aaKnown RBP11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 NUP98P52948 1817 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ZNF831Q5JPB2 1677 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ZNF213O14771 459 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ALX1Q15699 326 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ADALQ6DHV7 355 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CKAP2LQ8IYA6 745 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 MRPS27Q92552 414 aaKnown RBP11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
TNFRSF11B-201ENST00000297350 FGAP02671 866 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ADD2P35612 726 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PLCB2Q00722 1185 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CPLX2Q6PUV4 134 aaKnown RBP11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 LUZP1Q86V48 1076 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 DNAJC10Q8IXB1 793 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ENGASEQ8NFI3 743 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PIGBQ92521 554 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 MROH5Q6ZUA9 1318 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TIAM2Q8IVF5 1701 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 LAMB2P55268 1798 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 GPAA1O43292 621 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 AP5Z1O43299 807 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PDE8AO60658 829 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TOM1O60784 492 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CHGBP05060 677 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ADORA1P30542 326 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CEP57L1Q8IYX8 460 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 VGLL2Q8N8G2 317 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 FBXO18Q8NFZ0 1043 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TRIM5Q9C035 493 aa11.68□□□□□ -0.54
TNFRSF11B-201ENST00000297350 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CPLX1O14810 134 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 FOXP2O15409 715 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ITGA6P23229 1130 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ZAP70P43403 619 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 LDHAL6AQ6ZMR3 332 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 TMEM87BQ96K49 555 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 MTA3Q9BTC8 594 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 CCDC9Q9Y3X0 531 aaKnown RBP11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 ME1P48163 572 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 SNW1Q13573 536 aaKnown RBP11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 PUM3Q15397 648 aaKnown RBP11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 FAM89AQ96GI7 184 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 KCNF1Q9H3M0 494 aa11.67□□□□□ -0.54
TNFRSF11B-201ENST00000297350 NID2Q14112 1375 aa11.66□□□□□ -0.54
TNFRSF11B-201ENST00000297350 RTL9Q8NET4 1388 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms