RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MAGEB6P1A0A0J9YX57 407 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 HSPA4P34932 840 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 CT47A1Q5JQC4 288 aaPredicted RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 DRC1Q96MC2 740 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 ARGLU1Q9NWB6 273 aaPredicted RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 MCM9Q9NXL9 1143 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 IBTKQ9P2D0 1353 aaPredicted RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 SMTNL1A8MU46 457 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 UBASH3AP57075 661 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 CCDC70Q6NSX1 233 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 KAT14Q9H8E8 782 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 IFNKQ9P0W0 207 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 MYO3AQ8NEV4 1616 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 EYA2O00167 538 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 EPB41L2O43491 1005 aaKnown RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 ZNF174Q15697 407 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 GJB4Q9NTQ9 266 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 CCDC194A0A1B0GVG4 234 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 TSPY3P0CV98 308 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 TSPY8P0CW00 308 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 TAF3Q5VWG9 929 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 WASF1Q92558 559 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 INCENPQ9NQS7 918 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 ZNF532Q9HCE3 1301 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 SPTLC2O15270 562 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 SKILP12757 684 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 MATR3P43243 847 aaKnown RBP eCLIP5.51□□□□□ -1.53
UBR1-201ENST00000290650 KARSQ15046 597 aaKnown RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 TMEM132AQ24JP5 1023 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 AXDND1Q5T1B0 1012 aaPredicted RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 SSH3Q8TE77 659 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 EEF2KMTQ96G04 330 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 KIDINS220Q9ULH0 1771 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 ZNF853P0CG23 659 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 ARHGAP29Q52LW3 1261 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 FAM47AQ5JRC9 791 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 RUFY1Q96T51 708 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 GPHNQ9NQX3 736 aaPredicted RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 DBNLQ9UJU6 430 aaKnown RBP5.51□□□□□ -1.53
UBR1-201ENST00000290650 NLRP1Q9C000 1473 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 BCAMP50895 628 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 EPHA10Q5JZY3 1008 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 CEP135Q66GS9 1140 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 GREM2Q9H772 168 aa5.51□□□□□ -1.53
UBR1-201ENST00000290650 BAZ2BQ9UIF8 2168 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 MLH3Q9UHC1 1453 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 E7EWF7 191 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 STIM1Q13586 685 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CCDC178Q5BJE1 867 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 MRPS27Q92552 414 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 SLAIN2Q9P270 581 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CASQ1P31415 396 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 GYG1P46976 350 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 LONRF3Q496Y0 759 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 ZC3H13Q5T200 1668 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 VWA3AA6NCI4 1184 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CBFA2T2O43439 604 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CCT6AP40227 531 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 ZSCAN16Q9H4T2 348 aaPredicted RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 ZNHIT6Q9NWK9 470 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 ZKSCAN5Q9Y2L8 839 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 M0R2C6 588 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 ARID5AQ03989 594 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 GPS2Q13227 327 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 FAM200AQ8TCP9 573 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 PRM3Q9NNZ6 103 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CEP131Q9UPN4 1083 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 ADD1P35611 737 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 TERF1P54274 439 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 SNW1Q13573 536 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 FKBP15Q5T1M5 1219 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CCDC102BQ68D86 513 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 LEO1Q8WVC0 666 aaPredicted RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.5□□□□□ -1.53
UBR1-201ENST00000290650 LSG1Q9H089 658 aaKnown RBP5.5□□□□□ -1.53
UBR1-201ENST00000290650 DACH1Q9UI36 760 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 IGSF1Q8N6C5 1336 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CCDC196A0A1B0GTZ2 297 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 LRMPQ12912 555 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 KIF4BQ2VIQ3 1234 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 HSP90B2PQ58FF3 399 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CCDC102AQ96A19 550 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 NLRP3Q96P20 1036 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 MAP7D2Q96T17 732 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 CBX8Q9HC52 389 aa5.5□□□□□ -1.53
UBR1-201ENST00000290650 ATP7BP35670 1465 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 KIF18AQ8NI77 898 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 UBXN4Q92575 508 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 TEX13AQ9BXU3 409 aaPredicted RBP5.49□□□□□ -1.53
UBR1-201ENST00000290650 SEC31BQ9NQW1 1179 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 A2ML1A8K2U0 1454 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 IQGAP1P46940 1657 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 GOLGA8FQ08AF8 430 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 GOLGA8DPQ0D2H9 430 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 RRAGBQ5VZM2 374 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 TRMT44Q8IYL2 757 aaKnown RBP5.49□□□□□ -1.53
UBR1-201ENST00000290650 KBTBD3Q8NAB2 608 aa5.49□□□□□ -1.53
UBR1-201ENST00000290650 RNF41Q9H4P4 317 aaPredicted RBP5.49□□□□□ -1.53
UBR1-201ENST00000290650 DNAI1Q9UI46 699 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms