RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
CACNA1D-201ENST00000288139 SSBP05455 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 UBASH3AP57075 661 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 TMC6Q7Z403 805 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 CEP170Q5SW79 1584 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 A0A1W2PRG0 241 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 SAMD15Q9P1V8 674 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 AFAP1L2Q8N4X5 818 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 C14orf93Q9H972 538 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 TET3O43151 1660 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC84Q86UT8 332 aaPredicted RBP9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 IQCA1Q86XH1 822 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 EVI5O60447 810 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 LUC7L2Q9Y383 392 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 GNAT2P19087 354 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 IRX4P78413 519 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 GBP7Q8N8V2 638 aaPredicted RBP9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 ATRIPQ8WXE1 791 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 KRT23Q9C075 422 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 TRPM2O94759 1503 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 DISP3Q9P2K9 1392 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC151A5D8V7 595 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 NUP58Q9BVL2 599 aa9.44□□□□□ -0.9
CACNA1D-201ENST00000288139 CALM1P0DP23 149 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 CALM2P0DP24 149 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 CALM3P0DP25 149 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 VTI1AQ96AJ9 217 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 TEX13AQ9BXU3 409 aaPredicted RBP9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 MXRA7P84157 204 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 MYL5Q02045 173 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 PRR16Q569H4 304 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 AFAP1L1Q8TED9 768 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 GJB2P29033 226 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 PRIM1P49642 420 aaKnown RBP9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 FLIIQ13045 1269 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 ANKFY1Q9P2R3 1169 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 MTRF1LQ9UGC7 380 aaKnown RBP9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 MAP3K7CLP57077 242 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 RILPL1Q5EBL4 403 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC129Q6ZRS4 1044 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 GGNBP2Q9H3C7 697 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 CNNM1Q9NRU3 951 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 CWC27Q6UX04 472 aaKnown RBP9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 LMNTD2Q8IXW0 634 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 WHAMMP3Q1A5X7 153 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 MSANTD4Q8NCY6 345 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 FAM71BQ8TC56 605 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 TCHHQ07283 1943 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 CRCPO75575 148 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 ERMNQ8TAM6 284 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 VCXQ9H320 206 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 GIMAP4Q9NUV9 329 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 BCAP29Q9UHQ4 241 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 RTL9Q8NET4 1388 aa9.43□□□□□ -0.9
CACNA1D-201ENST00000288139 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 CEP120Q8N960 986 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 MLKLQ8NB16 471 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 TACC3Q9Y6A5 838 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 PLB1Q6P1J6 1458 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 TRIM37O94972 964 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 TTC39AQ5SRH9 613 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 NCOA7Q8NI08 942 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 MAGEF1Q9HAY2 307 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 IQGAP3Q86VI3 1631 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC144CPQ8IYA2 1237 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 NAP1L4Q99733 375 aaKnown RBP9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 PLCB1Q9NQ66 1216 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 RNF14Q9UBS8 474 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 VCX3BQ9H321 246 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 MAP3K12Q12852 859 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 MAP3K21Q5TCX8 1036 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 AIDAQ96BJ3 306 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 CLSTN2Q9H4D0 955 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 TAOK1Q7L7X3 1001 aa9.42□□□□□ -0.9
CACNA1D-201ENST00000288139 MAP2K2P36507 400 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 ARAP3Q8WWN8 1544 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SYCP2Q9BX26 1530 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 ACTN4O43707 911 aaKnown RBP9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 RNF8O76064 485 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SEPT2Q15019 361 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 CACNA2D3Q8IZS8 1091 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SLC12A7Q9Y666 1083 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 GOLGA8BA8MQT2 603 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 AKR1B10O60218 316 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SDSP20132 328 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 FOSBP53539 338 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 ZNF569Q5MCW4 686 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC186Q7Z3E2 898 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 IFT20Q8IY31 132 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 USP26Q9BXU7 913 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 N4BP3O15049 544 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 WDR46O15213 610 aaKnown RBP9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 ATP2A2P16615 1042 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms