RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PTPRMP28827 1452 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 SLC5A1P13866 664 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 DNA2P51530 1060 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 ARFGAP3Q9NP61 516 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 SASH1O94885 1247 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 FTOQ9C0B1 505 aaKnown RBP eCLIP14.41□□□□□ -0.1
SLC6A1-201ENST00000287766 SETBP1Q9Y6X0 1596 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 NEMFO60524 1076 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 CAPN2P17655 700 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 PLBD2Q8NHP8 589 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 DACH1Q9UI36 760 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 PHACTR2O75167 634 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 TXLNAP40222 546 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 AFMP43652 599 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 LRRC24Q50LG9 513 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 SPECC1Q5M775 1068 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 GTF3C6Q969F1 213 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 TM6SF1Q9BZW5 370 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 B4E1Z4 1266 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 CCDC148Q8NFR7 591 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 UBASH3AP57075 661 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 CCDC102BQ68D86 513 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 WASF1Q92558 559 aa14.4□□□□□ -0.1
SLC6A1-201ENST00000287766 MAP4K1Q92918 833 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 ARHGEF40Q8TER5 1519 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 GOLGA6L10A0A0M3HER8 536 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 MAP9Q49MG5 647 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 KCNG4Q8TDN1 519 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 XAGE2Q96GT9 111 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 MED14O60244 1454 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 ANKRD62A6NC57 917 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 ATP2C2O75185 946 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 ATP5JP18859 108 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 KDRP35968 1356 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 CPSF1Q10570 1443 aaKnown RBP14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
SLC6A1-201ENST00000287766 EXOC5O00471 708 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 MICALL1Q8N3F8 863 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 PHKBQ93100 1093 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 TAF5LO75529 589 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 ZAP70P43403 619 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 CCDC113Q9H0I3 377 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 INCENPQ9NQS7 918 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 OGFRQ9NZT2 677 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 NRBP1Q9UHY1 535 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 ZFYP08048 801 aaPredicted RBP14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 IQCEQ6IPM2 695 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 USP28Q96RU2 1077 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 PUS3Q9BZE2 481 aaKnown RBP14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 JAG2Q9Y219 1238 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 INO80Q9ULG1 1556 aaPredicted RBP14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 IRS4O14654 1257 aaPredicted RBP14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 GSDMDP57764 484 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 POLA2Q14181 598 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 FEZ1Q99689 392 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 SLC4A4Q9Y6R1 1079 aa14.38□□□□□ -0.11
SLC6A1-201ENST00000287766 ADGRB1O14514 1584 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 E7EWF7 191 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 SLU7O95391 586 aaKnown RBP14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 IL2RBP14784 551 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 PYCARDQ9ULZ3 195 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 ABCA9Q8IUA7 1624 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 CYP21A2P08686 494 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 PHKG2P15735 406 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 MAGEB6Q8N7X4 407 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 RASSF4Q9H2L5 321 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 BCCIPQ9P287 314 aaKnown RBP eCLIP14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 CPS1P31327 1500 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 ZNF75DP51815 510 aa14.37□□□□□ -0.11
SLC6A1-201ENST00000287766 GPAA1O43292 621 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 ZNF500O60304 480 aaPredicted RBP14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 CAVIN2O95810 425 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 FAM160A1Q05DH4 1040 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 WTAPQ15007 396 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 TTF1Q15361 905 aaPredicted RBP14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 DNAJC10Q8IXB1 793 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 CHGBP05060 677 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 CYP7A1P22680 504 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 STX17P56962 302 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 PIP4K2BP78356 416 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 ZHX3Q9H4I2 956 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 PLEKHG1Q9ULL1 1385 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 CAMSAP1Q5T5Y3 1602 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 CCDC196A0A1B0GTZ2 297 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 KIDINS220Q9ULH0 1771 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 CAVIN4Q5BKX8 364 aa14.36□□□□□ -0.11
SLC6A1-201ENST00000287766 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms