RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 RFX7Q2KHR2 1363 aa22.89■■□□□ 1.26
PDLIM3-202ENST00000284770 HIP1O00291 1037 aa22.89■■□□□ 1.26
PDLIM3-202ENST00000284770 IL1R1P14778 569 aa22.89■■□□□ 1.26
PDLIM3-202ENST00000284770 PSMD1Q99460 953 aa22.89■■□□□ 1.26
PDLIM3-202ENST00000284770 COA1Q9GZY4 146 aa22.89■■□□□ 1.26
PDLIM3-202ENST00000284770 BCS1LQ9Y276 419 aa22.89■■□□□ 1.25
PDLIM3-202ENST00000284770 COL1A1P02452 1464 aaPredicted RBP22.88■■□□□ 1.25
PDLIM3-202ENST00000284770 DIAPH3Q9NSV4 1193 aa22.88■■□□□ 1.25
PDLIM3-202ENST00000284770 PIH1D3Q9NQM4 214 aaKnown RBP22.87■■□□□ 1.25
PDLIM3-202ENST00000284770 LRRFIP1Q32MZ4 808 aaKnown RBP22.86■■□□□ 1.25
PDLIM3-202ENST00000284770 SYT17Q9BSW7 474 aa22.86■■□□□ 1.25
PDLIM3-202ENST00000284770 EIF5BO60841 1220 aaKnown RBP22.85■■□□□ 1.25
PDLIM3-202ENST00000284770 KIAA2012Q0VF49 1180 aa22.85■■□□□ 1.25
PDLIM3-202ENST00000284770 CWC27Q6UX04 472 aaKnown RBP22.85■■□□□ 1.25
PDLIM3-202ENST00000284770 ESYT1Q9BSJ8 1104 aa22.85■■□□□ 1.25
PDLIM3-202ENST00000284770 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDLIM3-202ENST00000284770 CHAF1AQ13111 956 aaPredicted RBP22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 RUFY2Q8WXA3 655 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 VPS33BQ9H267 617 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 G3V3G9 751 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 RNF113AO15541 343 aaKnown RBP22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 IDH1O75874 414 aaKnown RBP22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 ZFYP08048 801 aaPredicted RBP22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 DOK7Q18PE1 504 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 DCAF8Q5TAQ9 597 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 ZSCAN25Q6NSZ9 544 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 PODNQ7Z5L7 613 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 WDR66Q8TBY9 1149 aa22.84■■□□□ 1.25
PDLIM3-202ENST00000284770 MAP3K12Q12852 859 aa22.83■■□□□ 1.24
PDLIM3-202ENST00000284770 NMIQ13287 307 aaPredicted RBP22.83■■□□□ 1.24
PDLIM3-202ENST00000284770 AOC3Q16853 763 aa22.83■■□□□ 1.24
PDLIM3-202ENST00000284770 FAM227BQ96M60 508 aa22.83■■□□□ 1.24
PDLIM3-202ENST00000284770 PPIP5K2O43314 1243 aa22.82■■□□□ 1.24
PDLIM3-202ENST00000284770 LRP2BPQ9P2M1 347 aa22.82■■□□□ 1.24
PDLIM3-202ENST00000284770 ABCF2Q9UG63 623 aa22.82■■□□□ 1.24
PDLIM3-202ENST00000284770 SALL1Q9NSC2 1324 aa22.82■■□□□ 1.24
PDLIM3-202ENST00000284770 GOLGB1Q14789 3259 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 SGSM2O43147 1006 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 CHGBP05060 677 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 MFAP1P55081 439 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 SLC9C2Q5TAH2 1124 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 JAG2Q9Y219 1238 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 FAM205AQ6ZU69 1335 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 MYH13Q9UKX3 1938 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 A0A0D9SFI3 127 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 ZGPATQ8N5A5 531 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 IL25Q9H293 177 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 TAOK3Q9H2K8 898 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 DBNDD1Q9H9R9 158 aa22.81■■□□□ 1.24
PDLIM3-202ENST00000284770 ADD2P35612 726 aa22.8■■□□□ 1.24
PDLIM3-202ENST00000284770 ZMYM1Q5SVZ6 1142 aa22.8■■□□□ 1.24
PDLIM3-202ENST00000284770 UPF2Q9HAU5 1272 aaKnown RBP22.8■■□□□ 1.24
PDLIM3-202ENST00000284770 ZNF277Q9NRM2 450 aaPredicted RBP22.8■■□□□ 1.24
PDLIM3-202ENST00000284770 RAD50Q92878 1312 aa22.8■■□□□ 1.24
PDLIM3-202ENST00000284770 ECE2O60344 883 aa22.79■■□□□ 1.24
PDLIM3-202ENST00000284770 REC8O95072 547 aa22.79■■□□□ 1.24
PDLIM3-202ENST00000284770 UBE3CQ15386 1083 aa22.79■■□□□ 1.24
PDLIM3-202ENST00000284770 HELLSQ9NRZ9 838 aa22.79■■□□□ 1.24
PDLIM3-202ENST00000284770 DOCK2Q92608 1830 aa22.79■■□□□ 1.24
PDLIM3-202ENST00000284770 NFKBIEO00221 500 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 IGSF3O75054 1194 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 PDE6AP16499 860 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 GTF2IP78347 998 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 SLFNL1Q499Z3 407 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 SPTY2D1Q68D10 685 aaPredicted RBP22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 ERICH6Q7L0X2 663 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 TBC1D22AQ8WUA7 517 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 TBC1D32Q96NH3 1257 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 RAI14Q9P0K7 980 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 ARFGEF1Q9Y6D6 1849 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 LTBP3Q9NS15 1303 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 FER1L6Q2WGJ9 1857 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 MCMDC2Q4G0Z9 681 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 LARGE2Q8N3Y3 721 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 MAGEB6Q8N7X4 407 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 APPBP2Q92624 585 aa22.78■■□□□ 1.24
PDLIM3-202ENST00000284770 TCRBV5S4A2TA0A5A2 114 aa22.77■■□□□ 1.24
PDLIM3-202ENST00000284770 IARSP41252 1262 aaKnown RBP22.77■■□□□ 1.24
PDLIM3-202ENST00000284770 TTLL5Q6EMB2 1281 aa22.77■■□□□ 1.24
PDLIM3-202ENST00000284770 SEC62Q99442 399 aaKnown RBP22.77■■□□□ 1.24
PDLIM3-202ENST00000284770 ZNF532Q9HCE3 1301 aa22.77■■□□□ 1.24
PDLIM3-202ENST00000284770 PRDX5P30044 214 aa22.76■■□□□ 1.23
PDLIM3-202ENST00000284770 MFSD14BQ5SR56 506 aa22.76■■□□□ 1.23
PDLIM3-202ENST00000284770 OSBP2Q969R2 916 aa22.76■■□□□ 1.23
PDLIM3-202ENST00000284770 MYO5AQ9Y4I1 1855 aaKnown RBP22.76■■□□□ 1.23
PDLIM3-202ENST00000284770 CHD4Q14839 1912 aa22.76■■□□□ 1.23
PDLIM3-202ENST00000284770 LDHBP07195 334 aaKnown RBP22.75■■□□□ 1.23
PDLIM3-202ENST00000284770 TMED8Q6PL24 325 aaPredicted RBP22.75■■□□□ 1.23
PDLIM3-202ENST00000284770 NSUN4Q96CB9 384 aaKnown RBP22.75■■□□□ 1.23
PDLIM3-202ENST00000284770 ANO2Q9NQ90 1003 aa22.75■■□□□ 1.23
PDLIM3-202ENST00000284770 KCNQ5Q9NR82 932 aa22.75■■□□□ 1.23
PDLIM3-202ENST00000284770 MYH7P12883 1935 aa22.75■■□□□ 1.23
PDLIM3-202ENST00000284770 ANP32AP39687 249 aaKnown RBP22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 MECOMQ03112 1051 aa22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 STRIP1Q5VSL9 837 aa22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 KIAA1211Q6ZU35 1233 aa22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 ZNF589Q86UQ0 364 aaPredicted RBP22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 USP26Q9BXU7 913 aa22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 C22orf23Q9BZE7 217 aa22.74■■□□□ 1.23
PDLIM3-202ENST00000284770 PUS7LQ9H0K6 701 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms