RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CD2APQ9Y5K6 639 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 PDE8AO60658 829 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 F12P00748 615 aaPredicted RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 ST13P50502 369 aaKnown RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 POU5F1BQ06416 359 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 ASTLQ6HA08 431 aaPredicted RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 ENAHQ8N8S7 591 aaPredicted RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 ANKRD42Q8N9B4 389 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 PNMA5Q96PV4 448 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 ZBED2Q9BTP6 218 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.39□□□□□ -1.87
CHD1-201ENST00000284049 FBXO9Q9UK97 447 aaPredicted RBP3.39□□□□□ -1.87
CHD1-201ENST00000284049 KDM2BQ8NHM5 1336 aa3.39□□□□□ -1.87
CHD1-201ENST00000284049 MEN1O00255 615 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ENPP3O14638 875 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 TNFRSF21O75509 655 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 TBC1D8BQ0IIM8 1120 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 SETDB1Q15047 1291 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 PDCD2Q16342 344 aaPredicted RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 ARHGAP29Q52LW3 1261 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 PDE12Q6L8Q7 609 aaKnown RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 CCDC70Q6NSX1 233 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 CCDC116Q8IYX3 515 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 LRGUKQ96M69 825 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ZFYVE1Q9HBF4 777 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 SWAP70Q9UH65 585 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 INHAP05111 366 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 PI16Q6UXB8 463 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 FOXJ1Q92949 421 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ALKBH8Q96BT7 664 aaKnown RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 FAM86C2PA6NEL3 165 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 U2AF1L5P0DN76 240 aaPredicted RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 SCTRP47872 440 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 U2AF1Q01081 240 aaKnown RBP eCLIP3.38□□□□□ -1.87
CHD1-201ENST00000284049 UBE4AQ14139 1066 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 C1orf228Q6PIY5 440 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ACSBG1Q96GR2 724 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 OPA1O60313 960 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 SCGB1D2O95969 90 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 NAT2P11245 290 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 CASP2P42575 452 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 TRAPPC10P48553 1259 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 IDH3AP50213 366 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 KRBA2Q6ZNG9 492 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 KIAA0907Q7Z7F0 614 aaPredicted RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 EMID1Q96A84 441 aaPredicted RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 ZSCAN10Q96SZ4 725 aaPredicted RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 PAGR1Q9BTK6 254 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 SLC6A16Q9GZN6 736 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ZNF180Q9UJW8 692 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 CHIC2Q9UKJ5 165 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 REREQ9P2R6 1566 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 C19orf67A6NJJ6 358 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ERVH48-1M5A8F1 160 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ADCY1Q08828 1119 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 PNMA8AQ86V59 439 aaPredicted RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 BAP1Q92560 729 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ARPC5LQ9BPX5 153 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 RSRP1Q9BUV0 290 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 MKS1Q9NXB0 559 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 RAPGEF2Q9Y4G8 1499 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 DISP1Q96F81 1524 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.38□□□□□ -1.87
CHD1-201ENST00000284049 TSPAN6O43657 245 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 STAU1O95793 577 aaKnown RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 PTMAP06454 111 aaKnown RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 PPP2R3AQ06190 1150 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 C11orf96Q7Z7L8 435 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 ZNF511Q8NB15 262 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 RIN3Q8TB24 985 aa3.38□□□□□ -1.87
CHD1-201ENST00000284049 RTCBQ9Y3I0 505 aaKnown RBP3.38□□□□□ -1.87
CHD1-201ENST00000284049 DXOO77932 396 aaKnown RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 CTSHP09668 335 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 LIG1P18858 919 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 RASGRF1Q13972 1273 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 USPL1Q5W0Q7 1092 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 ZNF280DQ6N043 979 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 ETNK1Q9HBU6 452 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 LEMD3Q9Y2U8 911 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 CEP170Q5SW79 1584 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 TGFBR3LH3BV60 316 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 KATNA1O75449 491 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 RASGRP1O95267 797 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 PF4P02776 101 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 NEK4P51957 841 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 TMPRSS15P98073 1019 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 CCDC174Q6PII3 467 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 ETFBKMTQ8IXQ9 262 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 CPXCR1Q8N123 301 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 LRRC47Q8N1G4 583 aaKnown RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 OSBPL7Q9BZF2 842 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 PPM1HQ9ULR3 514 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 FCF1Q9Y324 198 aaKnown RBP3.37□□□□□ -1.87
CHD1-201ENST00000284049 CCER2I3L3R5 266 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 NPR3P17342 541 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 CDC27P30260 824 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 PDE6BP35913 854 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 GGCXP38435 758 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 TTBK2Q6IQ55 1244 aa3.37□□□□□ -1.87
CHD1-201ENST00000284049 MYO19Q96H55 970 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms