RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 CCDC66A2RUB6 948 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 HSP90B1P14625 803 aaKnown RBP13.27□□□□□ -0.29
SCLT1-201ENST00000281142 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 GTF3C6Q969F1 213 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 MRFAP1L1Q96HT8 127 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 TIGD1Q96MW7 591 aa13.27□□□□□ -0.29
SCLT1-201ENST00000281142 BECN2A8MW95 431 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
SCLT1-201ENST00000281142 SLC20A2Q08357 652 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 ERCC6LQ2NKX8 1250 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 SARM1Q6SZW1 724 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 Q6ZUG5 572 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
SCLT1-201ENST00000281142 CAPN2P17655 700 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 MED23Q9ULK4 1368 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 MTX1Q13505 466 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 FAM53CQ9NYF3 392 aa13.26□□□□□ -0.29
SCLT1-201ENST00000281142 SCRN1Q12765 414 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 SNW1Q13573 536 aaKnown RBP13.25□□□□□ -0.29
SCLT1-201ENST00000281142 ANKRD1Q15327 319 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 STX1AQ16623 288 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
SCLT1-201ENST00000281142 TAF5LO75529 589 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 SLU7O95391 586 aaKnown RBP13.25□□□□□ -0.29
SCLT1-201ENST00000281142 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
SCLT1-201ENST00000281142 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
SCLT1-201ENST00000281142 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
SCLT1-201ENST00000281142 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-201ENST00000281142 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
SCLT1-201ENST00000281142 CICQ96RK0 1608 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-201ENST00000281142 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
SCLT1-201ENST00000281142 SYT10Q6XYQ8 523 aa13.24□□□□□ -0.29
SCLT1-201ENST00000281142 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-201ENST00000281142 COL5A3P25940 1745 aaPredicted RBP13.24□□□□□ -0.29
SCLT1-201ENST00000281142 KCNQ4P56696 695 aa13.24□□□□□ -0.29
SCLT1-201ENST00000281142 GORABQ5T7V8 394 aa13.24□□□□□ -0.29
SCLT1-201ENST00000281142 LOC102724428A0A0B4J2F2 783 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 TULP2O00295 520 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 HOXB7P09629 217 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 SIK1P57059 783 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 AIMP1Q12904 312 aaKnown RBP13.23□□□□□ -0.29
SCLT1-201ENST00000281142 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
SCLT1-201ENST00000281142 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
SCLT1-201ENST00000281142 NEK1Q96PY6 1258 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 NCOA5Q9HCD5 579 aaKnown RBP13.23□□□□□ -0.29
SCLT1-201ENST00000281142 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
SCLT1-201ENST00000281142 SNRKQ9NRH2 765 aa13.23□□□□□ -0.29
SCLT1-201ENST00000281142 CTDNEP1O95476 244 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 DNAJC10Q8IXB1 793 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 FSIP1Q8NA03 581 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 CYP21A2P08686 494 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 ITPK1Q13572 414 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 PTPN21Q16825 1174 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
SCLT1-201ENST00000281142 HIP1O00291 1037 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 NEMFO60524 1076 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 CLCN6P51797 869 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 ENGASEQ8NFI3 743 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 BIN1O00499 593 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 KINO60870 393 aaKnown RBP13.21□□□□□ -0.29
SCLT1-201ENST00000281142 ME1P48163 572 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.29
SCLT1-201ENST00000281142 APOBRQ0VD83 1088 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 DPCR1Q3MIW9 517 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 CCDC73Q6ZRK6 1079 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 TMC6Q7Z403 805 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 XPO4Q9C0E2 1151 aaKnown RBP13.21□□□□□ -0.29
SCLT1-201ENST00000281142 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.29
SCLT1-201ENST00000281142 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 FHOD1Q9Y613 1164 aa13.21□□□□□ -0.29
SCLT1-201ENST00000281142 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.3
SCLT1-201ENST00000281142 SMC2O95347 1197 aa13.21□□□□□ -0.3
SCLT1-201ENST00000281142 APBA3O96018 575 aa13.21□□□□□ -0.3
SCLT1-201ENST00000281142 NSUN7Q8NE18 718 aaKnown RBP13.21□□□□□ -0.3
SCLT1-201ENST00000281142 H2AFXP16104 143 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-201ENST00000281142 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 CHST3Q7LGC8 479 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 IFNKQ9P0W0 207 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 PTPDC1A2A3K4 754 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 CAVIN2O95810 425 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 PDIA6Q15084 440 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 OTUD7BQ6GQQ9 843 aa13.2□□□□□ -0.3
SCLT1-201ENST00000281142 EPC1Q9H2F5 836 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms