RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 DHX32Q7L7V1 743 aaKnown RBP21.26■□□□□ 0.99
CAPN1-201ENST00000279247 TAF1P21675 1872 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 ZFYP08048 801 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-201ENST00000279247 SPATA5Q8NB90 893 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 SRCAPQ6ZRS2 3230 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 SYCE3A1L190 88 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 NBPF5PQ86XG9 351 aaPredicted RBP21.26■□□□□ 0.99
CAPN1-201ENST00000279247 MAGEB6Q8N7X4 407 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 ABCF2Q9UG63 623 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 DENND2AQ9ULE3 1009 aa21.26■□□□□ 0.99
CAPN1-201ENST00000279247 MYO5AQ9Y4I1 1855 aaKnown RBP21.25■□□□□ 0.99
CAPN1-201ENST00000279247 GYG1P46976 350 aa21.25■□□□□ 0.99
CAPN1-201ENST00000279247 PDE6AP16499 860 aa21.25■□□□□ 0.99
CAPN1-201ENST00000279247 ADD2P35612 726 aa21.25■□□□□ 0.99
CAPN1-201ENST00000279247 IMMTQ16891 758 aaKnown RBP21.25■□□□□ 0.99
CAPN1-201ENST00000279247 SETDB2Q96T68 719 aa21.25■□□□□ 0.99
CAPN1-201ENST00000279247 BCL2L12Q9HB09 334 aa21.25■□□□□ 0.99
CAPN1-201ENST00000279247 FGFR2P21802 821 aa21.24■□□□□ 0.99
CAPN1-201ENST00000279247 MRE11P49959 708 aa21.24■□□□□ 0.99
CAPN1-201ENST00000279247 FAM196AQ6ZSG2 479 aa21.24■□□□□ 0.99
CAPN1-201ENST00000279247 ANKRD18AQ8IVF6 992 aa21.24■□□□□ 0.99
CAPN1-201ENST00000279247 CELF1Q92879 486 aaKnown RBP21.24■□□□□ 0.99
CAPN1-201ENST00000279247 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
CAPN1-201ENST00000279247 BTAF1O14981 1849 aa21.24■□□□□ 0.99
CAPN1-201ENST00000279247 SCRN1Q12765 414 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 UQCRFS1P1P0C7P4 283 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 AIDAQ96BJ3 306 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 MIGA1Q8NAN2 632 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 GTF3C6Q969F1 213 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 CDC5LQ99459 802 aaKnown RBP21.23■□□□□ 0.99
CAPN1-201ENST00000279247 INCENPQ9NQS7 918 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 SPEF2Q9C093 1822 aa21.23■□□□□ 0.99
CAPN1-201ENST00000279247 ZNF213O14771 459 aa21.22■□□□□ 0.99
CAPN1-201ENST00000279247 TTF1Q15361 905 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-201ENST00000279247 ARHGEF1Q92888 912 aaKnown RBP21.22■□□□□ 0.99
CAPN1-201ENST00000279247 AK7Q96M32 723 aa21.22■□□□□ 0.99
CAPN1-201ENST00000279247 UTRNP46939 3433 aa21.22■□□□□ 0.99
CAPN1-201ENST00000279247 RBM6P78332 1123 aaKnown RBP21.22■□□□□ 0.99
CAPN1-201ENST00000279247 CLEC4GQ6UXB4 293 aa21.22■□□□□ 0.99
CAPN1-201ENST00000279247 FAM184AQ8NB25 1140 aa21.22■□□□□ 0.99
CAPN1-201ENST00000279247 BCL11BQ9C0K0 894 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-201ENST00000279247 LRP2BPQ9P2M1 347 aa21.22■□□□□ 0.99
CAPN1-201ENST00000279247 TFIP11Q9UBB9 837 aaKnown RBP21.22■□□□□ 0.99
CAPN1-201ENST00000279247 RGS17Q9UGC6 210 aaPredicted RBP21.22■□□□□ 0.99
CAPN1-201ENST00000279247 ABCC12Q96J65 1359 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 AKAP11Q9UKA4 1901 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 KDM4AO75164 1064 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 SLC51AQ86UW1 340 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 VPS37DQ86XT2 251 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 CTNNA3Q9UI47 895 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 JAG2Q9Y219 1238 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 COL4A1P02462 1669 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 ARID4AP29374 1257 aaPredicted RBP21.21■□□□□ 0.99
CAPN1-201ENST00000279247 POTEAQ6S8J7 498 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 ARMT1Q9H993 441 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 GUCY1B3Q02153 619 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 ZSCAN25Q6NSZ9 544 aa21.21■□□□□ 0.99
CAPN1-201ENST00000279247 RALYLQ86SE5 291 aaKnown RBP21.21■□□□□ 0.99
CAPN1-201ENST00000279247 RPS6KA4O75676 772 aa21.2■□□□□ 0.98
CAPN1-201ENST00000279247 MBD4O95243 580 aa21.2■□□□□ 0.98
CAPN1-201ENST00000279247 HMGB1P09429 215 aaKnown RBP21.2■□□□□ 0.98
CAPN1-201ENST00000279247 H3BQV1 296 aa21.2■□□□□ 0.98
CAPN1-201ENST00000279247 RFC4P35249 363 aa21.2■□□□□ 0.98
CAPN1-201ENST00000279247 IFFO2Q5TF58 517 aa21.2■□□□□ 0.98
CAPN1-201ENST00000279247 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
CAPN1-201ENST00000279247 RNF214Q8ND24 703 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 NARFQ9UHQ1 456 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 MAP3K12Q12852 859 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 NKX2-3Q8TAU0 364 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 TOMM22Q9NS69 142 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 ATP6V1DQ9Y5K8 247 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 CNTNAP4Q9C0A0 1308 aa21.19■□□□□ 0.98
CAPN1-201ENST00000279247 PRC1O43663 620 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 PRKAB2O43741 272 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 RXRBP28702 533 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 BRWD3Q6RI45 1802 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 MBD3O95983 291 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 KLRK1P26718 216 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 EXOSC10Q01780 885 aaKnown RBP21.18■□□□□ 0.98
CAPN1-201ENST00000279247 CEBPZQ03701 1054 aaKnown RBP21.18■□□□□ 0.98
CAPN1-201ENST00000279247 PROM2Q8N271 834 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 NLRP3Q96P20 1036 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
CAPN1-201ENST00000279247 RXRAP19793 462 aa21.17■□□□□ 0.98
CAPN1-201ENST00000279247 RAI14Q9P0K7 980 aa21.17■□□□□ 0.98
CAPN1-201ENST00000279247 PDCP20941 246 aa21.17■□□□□ 0.98
CAPN1-201ENST00000279247 LAMA4Q16363 1823 aa21.16■□□□□ 0.98
CAPN1-201ENST00000279247 RRP12Q5JTH9 1297 aaKnown RBP21.16■□□□□ 0.98
CAPN1-201ENST00000279247 TBC1D10CQ8IV04 446 aa21.16■□□□□ 0.98
CAPN1-201ENST00000279247 MINPP1Q9UNW1 487 aa21.16■□□□□ 0.98
CAPN1-201ENST00000279247 DDX60Q8IY21 1712 aaKnown RBP21.16■□□□□ 0.98
CAPN1-201ENST00000279247 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
CAPN1-201ENST00000279247 TRDNQ13061 729 aa21.16■□□□□ 0.98
CAPN1-201ENST00000279247 ALDH8A1Q9H2A2 487 aaPredicted RBP21.16■□□□□ 0.98
CAPN1-201ENST00000279247 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 B4E1Z4 1266 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 NASPP49321 788 aaPredicted RBP21.15■□□□□ 0.98
CAPN1-201ENST00000279247 UBE3CQ15386 1083 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 NCOA7Q8NI08 942 aa21.15■□□□□ 0.98
CAPN1-201ENST00000279247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms