RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 CHRNDQ07001 517 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 PUS7LQ9H0K6 701 aaKnown RBP10.53□□□□□ -0.72
SEC16A-201ENST00000277537 UTYO14607 1347 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 MAST3O60307 1309 aa10.53□□□□□ -0.72
SEC16A-201ENST00000277537 M0R2C6 588 aa10.52□□□□□ -0.72
SEC16A-201ENST00000277537 SLC3A2P08195 630 aaKnown RBP10.52□□□□□ -0.72
SEC16A-201ENST00000277537 CDC37L1Q7L3B6 337 aa10.52□□□□□ -0.72
SEC16A-201ENST00000277537 NYXQ9GZU5 481 aa10.52□□□□□ -0.72
SEC16A-201ENST00000277537 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.72
SEC16A-201ENST00000277537 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.72
SEC16A-201ENST00000277537 MROH5Q6ZUA9 1318 aa10.52□□□□□ -0.72
SEC16A-201ENST00000277537 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 UBE2HP62256 183 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 SPC24Q8NBT2 197 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 MYL10Q9BUA6 226 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 BCL11BQ9C0K0 894 aaPredicted RBP10.52□□□□□ -0.73
SEC16A-201ENST00000277537 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
SEC16A-201ENST00000277537 EPB41L2O43491 1005 aaKnown RBP10.52□□□□□ -0.73
SEC16A-201ENST00000277537 PRDM1O75626 825 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
SEC16A-201ENST00000277537 CNBD1Q8NA66 436 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 GPR108Q9NPR9 543 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 PPP1R1BQ9UD71 204 aaPredicted RBP10.52□□□□□ -0.73
SEC16A-201ENST00000277537 WWC3Q9ULE0 1092 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 CDKL5O76039 1030 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 CCDC192P0DO97 292 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 PDE6AP16499 860 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 MCAMP43121 646 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 ITPK1Q13572 414 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 CCDC183Q5T5S1 534 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.73
SEC16A-201ENST00000277537 F8W031 263 aaPredicted RBP10.51□□□□□ -0.73
SEC16A-201ENST00000277537 RPS8P62241 208 aaKnown RBP10.51□□□□□ -0.73
SEC16A-201ENST00000277537 FAM196AQ6ZSG2 479 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 NWD1Q149M9 1564 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 MAGEB6P1A0A0J9YX57 407 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 IARSP41252 1262 aaKnown RBP10.51□□□□□ -0.73
SEC16A-201ENST00000277537 CUL4AQ13619 759 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 DSCC1Q9BVC3 393 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 MKNK2Q9HBH9 465 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 ZBTB43O43298 467 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 RBM5P52756 815 aaKnown RBP eCLIP10.51□□□□□ -0.73
SEC16A-201ENST00000277537 CCDC173Q0VFZ6 552 aa10.51□□□□□ -0.73
SEC16A-201ENST00000277537 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
SEC16A-201ENST00000277537 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
SEC16A-201ENST00000277537 GOLGA6L6A8MZA4 724 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 LETM1O95202 739 aaPredicted RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 TRIM28Q13263 835 aaKnown RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 GAS2L3Q86XJ1 694 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 UBE2Q2Q8WVN8 375 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 TRIM37O94972 964 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 XBP1P17861 261 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 IQCA1Q86XH1 822 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 TRIM5Q9C035 493 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 RRAGDQ9NQL2 400 aaPredicted RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 RIMBP2O15034 1052 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 WTAPQ15007 396 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 SDR42E1Q8WUS8 393 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 ZNF622Q969S3 477 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■□□□□ 10.3
SEC16A-201ENST00000277537 RNF41Q9H4P4 317 aaPredicted RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 PIH1D3Q9NQM4 214 aaKnown RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 USP25Q9UHP3 1055 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 FBXO3Q9UK99 471 aa10.5□□□□□ -0.73
SEC16A-201ENST00000277537 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
SEC16A-201ENST00000277537 ST5P78524 1137 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 RBM10P98175 930 aaKnown RBP10.49□□□□□ -0.73
SEC16A-201ENST00000277537 GPT2Q8TD30 523 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 DACT1Q9NYF0 836 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 ZDHHC9Q9Y397 364 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 SLIT3O75094 1523 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 HIBADHP31937 336 aaKnown RBP10.49□□□□□ -0.73
SEC16A-201ENST00000277537 SEPT12Q8IYM1 358 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 TRIM34Q9BYJ4 488 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 FAM13BQ9NYF5 915 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 MTMR6Q9Y217 621 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 USP42Q9H9J4 1324 aaKnown RBP10.49□□□□□ -0.73
SEC16A-201ENST00000277537 TSPY2A6NKD2 308 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 PDIA4P13667 645 aaKnown RBP10.49□□□□□ -0.73
SEC16A-201ENST00000277537 RASGRF1Q13972 1273 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 LRSAM1Q6UWE0 723 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 ALG1Q9BT22 464 aa10.49□□□□□ -0.73
SEC16A-201ENST00000277537 CYP2E1P05181 493 aaPredicted RBP10.48□□□□□ -0.73
SEC16A-201ENST00000277537 CASP7P55210 303 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 AATFQ9NY61 560 aaKnown RBP eCLIP10.48□□□□□ -0.73
SEC16A-201ENST00000277537 PRKAB2O43741 272 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 SSRP1Q08945 709 aaKnown RBP10.48□□□□□ -0.73
SEC16A-201ENST00000277537 FSIP1Q8NA03 581 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 PHKBQ93100 1093 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 GTF3C6Q969F1 213 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 KIF1AQ12756 1690 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 A0A0G2JLW4 131 aa10.48□□□□□ -0.73
SEC16A-201ENST00000277537 MARCH6O60337 910 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms