RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 NAA16Q6N069 864 aaPredicted RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 RBM43Q6ZSC3 357 aaKnown RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.89□□□□□ -0.51
CPNE9-201ENST00000273027 PIBF1Q8WXW3 757 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 FAM227BQ96M60 508 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 NUP62CLQ9H1M0 184 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 TPCN1Q9ULQ1 816 aa11.89□□□□□ -0.51
CPNE9-201ENST00000273027 FIBPO43427 364 aa11.88□□□□□ -0.51
CPNE9-201ENST00000273027 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
CPNE9-201ENST00000273027 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
CPNE9-201ENST00000273027 FAM200AQ8TCP9 573 aa11.88□□□□□ -0.51
CPNE9-201ENST00000273027 GTF3C6Q969F1 213 aa11.88□□□□□ -0.51
CPNE9-201ENST00000273027 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
CPNE9-201ENST00000273027 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
CPNE9-201ENST00000273027 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
CPNE9-201ENST00000273027 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
CPNE9-201ENST00000273027 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
CPNE9-201ENST00000273027 LARGE1O95461 756 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 ADCY5O95622 1261 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 MYL6BP14649 208 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
CPNE9-201ENST00000273027 DHX32Q7L7V1 743 aaKnown RBP11.87□□□□□ -0.51
CPNE9-201ENST00000273027 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 SMARCC2Q8TAQ2 1214 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 ZNF274Q96GC6 653 aaPredicted RBP11.87□□□□□ -0.51
CPNE9-201ENST00000273027 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 DBNLQ9UJU6 430 aaKnown RBP11.87□□□□□ -0.51
CPNE9-201ENST00000273027 LAMA4Q16363 1823 aa11.87□□□□□ -0.51
CPNE9-201ENST00000273027 WDR19Q8NEZ3 1342 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 PRAMEF22A3QJZ6 481 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 PFKFB2O60825 505 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 RASSF7Q02833 373 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 TFCP2Q12800 502 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 ZNF396Q96N95 335 aaPredicted RBP11.86□□□□□ -0.51
CPNE9-201ENST00000273027 GDPD2Q9HCC8 539 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
CPNE9-201ENST00000273027 USP16Q9Y5T5 823 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 BRCA1P38398 1863 aaKnown RBP11.86□□□□□ -0.51
CPNE9-201ENST00000273027 TJP1Q07157 1748 aa11.86□□□□□ -0.51
CPNE9-201ENST00000273027 DHX16O60231 1041 aaKnown RBP11.85□□□□□ -0.51
CPNE9-201ENST00000273027 DDR1Q08345 913 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 ST3GAL1Q11201 340 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 SLC39A6Q13433 755 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 ZMYM1Q5SVZ6 1142 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 UBE2Q2Q8WVN8 375 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 SIL1Q9H173 461 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 TNMDQ9H2S6 317 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 ARFGEF1Q9Y6D6 1849 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 ZNF609O15014 1411 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
CPNE9-201ENST00000273027 H3BQV1 296 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 EYA2O00167 538 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 PTCD1O75127 700 aaKnown RBP11.84□□□□□ -0.51
CPNE9-201ENST00000273027 SLC34A2O95436 690 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
CPNE9-201ENST00000273027 LMNB1P20700 586 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 EVCP57679 992 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 FOXO4P98177 505 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 EPHA10Q5JZY3 1008 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 TTC6Q86TZ1 520 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 VSIG10Q8N0Z9 540 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 PLA2G12BQ9BX93 195 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 CLSTN2Q9H4D0 955 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
CPNE9-201ENST00000273027 TLR7Q9NYK1 1049 aaKnown RBP11.84□□□□□ -0.51
CPNE9-201ENST00000273027 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
CPNE9-201ENST00000273027 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE9-201ENST00000273027 SBF1O95248 1867 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 NEMFO60524 1076 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 CPA1P15085 419 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 CDC25BP30305 580 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 GTF2F1P35269 517 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 FGD1P98174 961 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 NOLC1Q14978 699 aaKnown RBP eCLIP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 CCDC158Q5M9N0 1113 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 LMBR1LQ6UX01 489 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 Q6ZUG5 572 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 LEO1Q8WVC0 666 aaPredicted RBP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 RCOR1Q9UKL0 485 aa11.83□□□□□ -0.52
CPNE9-201ENST00000273027 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 TNRC6CQ9HCJ0 1690 aaKnown RBP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
CPNE9-201ENST00000273027 MYH7P12883 1935 aa11.82□□□□□ -0.52
CPNE9-201ENST00000273027 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 CYP21A2P08686 494 aa11.82□□□□□ -0.52
CPNE9-201ENST00000273027 HSP90B1P14625 803 aaKnown RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 CRKLP46109 303 aaKnown RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 EXOSC10Q01780 885 aaKnown RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 TYRO3Q06418 890 aa11.82□□□□□ -0.52
CPNE9-201ENST00000273027 RESTQ13127 1097 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms