RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 NEDD4P46934 1319 aa19.88■□□□□ 0.77
SPG7-201ENST00000268704 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
SPG7-201ENST00000268704 OSBP2Q969R2 916 aa19.88■□□□□ 0.77
SPG7-201ENST00000268704 IFNKQ9P0W0 207 aa19.88■□□□□ 0.77
SPG7-201ENST00000268704 IFIT1P09914 478 aaKnown RBP19.87■□□□□ 0.77
SPG7-201ENST00000268704 STK38Q15208 465 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 SF3A1Q15459 793 aaKnown RBP19.87■□□□□ 0.77
SPG7-201ENST00000268704 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 LRRN4CLQ8ND94 238 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 PUS3Q9BZE2 481 aaKnown RBP19.87■□□□□ 0.77
SPG7-201ENST00000268704 TATP17735 454 aaPredicted RBP19.87■□□□□ 0.77
SPG7-201ENST00000268704 FKBP4Q02790 459 aaKnown RBP eCLIP19.87■□□□□ 0.77
SPG7-201ENST00000268704 FBXO38Q6PIJ6 1188 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 TMC6Q7Z403 805 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 LINC00301Q8NCQ3 95 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 DDX17Q92841 729 aaKnown RBP19.87■□□□□ 0.77
SPG7-201ENST00000268704 ABCC6O95255 1503 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 CYP27B1O15528 508 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 E4F1Q66K89 784 aaPredicted RBP19.87■□□□□ 0.77
SPG7-201ENST00000268704 ARMCX5Q6P1M9 558 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 TTLL7Q6ZT98 887 aa19.87■□□□□ 0.77
SPG7-201ENST00000268704 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
SPG7-201ENST00000268704 ADALQ6DHV7 355 aa19.86■□□□□ 0.77
SPG7-201ENST00000268704 ZNF274Q96GC6 653 aaPredicted RBP19.86■□□□□ 0.77
SPG7-201ENST00000268704 NAT10Q9H0A0 1025 aaKnown RBP19.86■□□□□ 0.77
SPG7-201ENST00000268704 RTEL1Q9NZ71 1219 aa19.86■□□□□ 0.77
SPG7-201ENST00000268704 KIAA1468Q9P260 1216 aa19.86■□□□□ 0.77
SPG7-201ENST00000268704 A0A1B0GUL7 405 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 RNF113AO15541 343 aaKnown RBP19.85■□□□□ 0.77
SPG7-201ENST00000268704 ZNF771Q7L3S4 317 aaPredicted RBP19.85■□□□□ 0.77
SPG7-201ENST00000268704 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 FOXP2O15409 715 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 CSB-PGBD3P0DP91 1061 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 PTPN21Q16825 1174 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 NBPF14Q5TI25 921 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
SPG7-201ENST00000268704 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 PLBD2Q8NHP8 589 aa19.85■□□□□ 0.77
SPG7-201ENST00000268704 PDE4CQ08493 712 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 IFNL2Q8IZJ0 200 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 C8orf76Q96K31 380 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 ZRSR1Q15695 479 aaKnown RBP19.84■□□□□ 0.77
SPG7-201ENST00000268704 CABLES1Q8TDN4 633 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 CCDC85AQ96PX6 553 aaPredicted RBP19.84■□□□□ 0.77
SPG7-201ENST00000268704 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 GOLGA8BA8MQT2 603 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 KIF20AO95235 890 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 CHRNA2Q15822 529 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 ZNF397Q8NF99 534 aaPredicted RBP19.84■□□□□ 0.77
SPG7-201ENST00000268704 ZBTB3Q9H5J0 574 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 ST7Q9NRC1 585 aa19.84■□□□□ 0.77
SPG7-201ENST00000268704 LMOD1P29536 600 aaPredicted RBP19.83■□□□□ 0.77
SPG7-201ENST00000268704 WASHC4Q2M389 1173 aa19.83■□□□□ 0.77
SPG7-201ENST00000268704 ATL3Q6DD88 541 aa19.83■□□□□ 0.77
SPG7-201ENST00000268704 SYT10Q6XYQ8 523 aa19.83■□□□□ 0.77
SPG7-201ENST00000268704 PPP1R13BQ96KQ4 1090 aa19.83■□□□□ 0.77
SPG7-201ENST00000268704 NWD2Q9ULI1 1742 aa19.83■□□□□ 0.77
SPG7-201ENST00000268704 MROH7-TTC4A0A0A0MT08 1334 aa19.83■□□□□ 0.76
SPG7-201ENST00000268704 MARCKSP29966 332 aaPredicted RBP19.83■□□□□ 0.76
SPG7-201ENST00000268704 PLCD3Q8N3E9 789 aa19.83■□□□□ 0.76
SPG7-201ENST00000268704 OSBPL5Q9H0X9 879 aaPredicted RBP19.83■□□□□ 0.76
SPG7-201ENST00000268704 DENND2AQ9ULE3 1009 aa19.83■□□□□ 0.76
SPG7-201ENST00000268704 MORC2Q9Y6X9 1032 aaPredicted RBP19.83■□□□□ 0.76
SPG7-201ENST00000268704 SPTLC2O15270 562 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 ATP1A3P13637 1013 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 ADORA1P30542 326 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 PI16Q6UXB8 463 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 AIFM3Q96NN9 605 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 ORC3Q9UBD5 711 aaPredicted RBP19.82■□□□□ 0.76
SPG7-201ENST00000268704 HPS5Q9UPZ3 1129 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 H7C1W4 665 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 MYSM1Q5VVJ2 828 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 PRC1O43663 620 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 ZNF202O95125 648 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 SLC3A2P08195 630 aaKnown RBP19.82■□□□□ 0.76
SPG7-201ENST00000268704 GSDMDP57764 484 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 CABP4P57796 275 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 ERO1AQ96HE7 468 aa19.82■□□□□ 0.76
SPG7-201ENST00000268704 TRPM3Q9HCF6 1732 aaPredicted RBP19.81■□□□□ 0.76
SPG7-201ENST00000268704 SLU7O95391 586 aaKnown RBP19.81■□□□□ 0.76
SPG7-201ENST00000268704 SCARF1Q14162 830 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 A0A1W2PQ27 194 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 A0A1W2PQ64 194 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 A0A1W2PQD8 194 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 IL15P40933 162 aaPredicted RBP19.81■□□□□ 0.76
SPG7-201ENST00000268704 ERCC6LQ2NKX8 1250 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 FBXO18Q8NFZ0 1043 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 NKX2-3Q8TAU0 364 aa19.81■□□□□ 0.76
SPG7-201ENST00000268704 EYA2O00167 538 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 PFKFB1P16118 471 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 RXRAP19793 462 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 ANTXR2P58335 489 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 NCAPHQ15003 741 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 DCAF5Q96JK2 942 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 CWC25Q9NXE8 425 aaPredicted RBP19.8■□□□□ 0.76
SPG7-201ENST00000268704 WDHD1O75717 1129 aaPredicted RBP19.8■□□□□ 0.76
SPG7-201ENST00000268704 FGAP02671 866 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 A1BGP04217 495 aa19.8■□□□□ 0.76
SPG7-201ENST00000268704 SFPQP23246 707 aaKnown RBP eCLIP19.8■□□□□ 0.763e-7■□□□□ 11.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms