RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 TSTA3Q13630 321 aaPredicted RBP14.19□□□□□ -0.14
CDH11-201ENST00000268603 MCM6Q14566 821 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 LIMCH1Q9UPQ0 1083 aa14.19□□□□□ -0.14
CDH11-201ENST00000268603 SCAPERQ9BY12 1400 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 SETSIPP0DME0 302 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 LACTBP83111 547 aaPredicted RBP14.18□□□□□ -0.14
CDH11-201ENST00000268603 RAB3GAP1Q15042 981 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 SEL1L2Q5TEA6 688 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 RIOK1Q9BRS2 568 aaKnown RBP14.18□□□□□ -0.14
CDH11-201ENST00000268603 STMN1P16949 149 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 RTN1Q16799 776 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 TTC31Q49AM3 519 aaPredicted RBP14.18□□□□□ -0.14
CDH11-201ENST00000268603 NEK11Q8NG66 645 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 CTAGE15A4D2H0 777 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 MGEA5O60502 916 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 CTAGE8P0CG41 777 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 CTAGE6Q86UF2 777 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 CTAGE4Q8IX94 777 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 NLRP3Q96P20 1036 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 CTAGE1Q96RT6 745 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 GDPD2Q9HCC8 539 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 CFTRP13569 1480 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 PSMA7O14818 248 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 UQCRFS1P1P0C7P4 283 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 EVI5LQ96CN4 794 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
CDH11-201ENST00000268603 SAMD15Q9P1V8 674 aa14.18□□□□□ -0.14
CDH11-201ENST00000268603 BRD4O60885 1362 aaPredicted RBP14.18□□□□□ -0.14
CDH11-201ENST00000268603 MAN1A1P33908 653 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 KRT79Q5XKE5 535 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 INTS8Q75QN2 995 aaKnown RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 WDR97A6NE52 1622 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 ZNF853P0CG23 659 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 EAPPQ56P03 285 aaPredicted RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 ZEB2O60315 1214 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 ESR2Q92731 530 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 PLIN2Q99541 437 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 MTRF1LQ9UGC7 380 aaKnown RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 NAIPQ13075 1403 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 KLF18A0A0U1RQI7 1052 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 CHMP2AO43633 222 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 GKAP1Q5VSY0 366 aaPredicted RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 UBLCP1Q8WVY7 318 aaPredicted RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 OATP04181 439 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 NEDD9Q14511 834 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 ZBTB43O43298 467 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 VIMP08670 466 aaKnown RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 ALG1Q9BT22 464 aa14.17□□□□□ -0.14
CDH11-201ENST00000268603 LUC7L2Q9Y383 392 aaKnown RBP14.17□□□□□ -0.14
CDH11-201ENST00000268603 SBNO2Q9Y2G9 1366 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 MCM5P33992 734 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
CDH11-201ENST00000268603 CDR2Q01850 454 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 STRN3Q13033 797 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 FRMD4BQ9Y2L6 1034 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 ATP11AP98196 1134 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 MAP7Q14244 749 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 FAM47CQ5HY64 1035 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 CASC4Q6P4E1 433 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 DHX58Q96C10 678 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 MTUS1Q9ULD2 1270 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 JAG2Q9Y219 1238 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 STK25O00506 426 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 PARD3BQ8TEW8 1205 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 GNAQP50148 359 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 KIFAP3Q92845 792 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 ITM2BQ9Y287 266 aa14.16□□□□□ -0.14
CDH11-201ENST00000268603 CALCOCO2Q13137 446 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 CACNA2D3Q8IZS8 1091 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 MAGEB6P1A0A0J9YX57 407 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 LRRC43Q8N309 656 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 NAP1L4Q99733 375 aaKnown RBP14.15□□□□□ -0.14
CDH11-201ENST00000268603 CASKIN1Q8WXD9 1431 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 GNL1P36915 607 aaPredicted RBP14.15□□□□□ -0.14
CDH11-201ENST00000268603 SRGAP1Q7Z6B7 1085 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 RNF169Q8NCN4 708 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 ADCY5O95622 1261 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 PCK1P35558 622 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 PPP1R12CQ9BZL4 782 aa14.15□□□□□ -0.14
CDH11-201ENST00000268603 SH2D4BQ5SQS7 431 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 ARFGAP3Q9NP61 516 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 BICDL2A1A5D9 508 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
CDH11-201ENST00000268603 ZYXQ15942 572 aaKnown RBP14.14□□□□□ -0.15
CDH11-201ENST00000268603 SUDS3Q9H7L9 328 aaPredicted RBP14.14□□□□□ -0.15
CDH11-201ENST00000268603 KRT19P08727 400 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 SKA2Q8WVK7 121 aaPredicted RBP14.14□□□□□ -0.15
CDH11-201ENST00000268603 NIP7Q9Y221 180 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDH11-201ENST00000268603 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDH11-201ENST00000268603 CNGA1P29973 690 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 MAEAQ7L5Y9 396 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 DBF4Q9UBU7 674 aaPredicted RBP14.14□□□□□ -0.15
CDH11-201ENST00000268603 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
CDH11-201ENST00000268603 TCIRG1Q13488 830 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms