RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MTERF4Q7Z6M4 381 aaKnown RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 NEUROD6Q96NK8 337 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 PUS3Q9BZE2 481 aaKnown RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 PCDH11XQ9BZA7 1347 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 PCDH11YQ9BZA8 1340 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 A0A1B0GUL7 405 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 H3BQV1 296 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 M0R2C6 588 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 IFFO2Q5TF58 517 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 SPC24Q8NBT2 197 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 OSBP2Q969R2 916 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 SYTL4Q96C24 671 aaPredicted RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 ZNF594Q96JF6 807 aaPredicted RBP14.63□□□□□ -0.07
BEST3-201ENST00000266661 GOLPH3LQ9H4A5 285 aa14.63□□□□□ -0.07
BEST3-201ENST00000266661 IFIT1P09914 478 aaKnown RBP14.62□□□□□ -0.07
BEST3-201ENST00000266661 FDPSP14324 419 aaKnown RBP14.62□□□□□ -0.07
BEST3-201ENST00000266661 PTGS1P23219 599 aa14.62□□□□□ -0.07
BEST3-201ENST00000266661 TRIM28Q13263 835 aaKnown RBP14.62□□□□□ -0.07
BEST3-201ENST00000266661 SARM1Q6SZW1 724 aa14.62□□□□□ -0.07
BEST3-201ENST00000266661 ZNF710Q8N1W2 664 aa14.62□□□□□ -0.07
BEST3-201ENST00000266661 BICD2Q8TD16 824 aa14.62□□□□□ -0.07
BEST3-201ENST00000266661 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
BEST3-201ENST00000266661 CDC25BP30305 580 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 ZNF165P49910 485 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 USP28Q96RU2 1077 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 DNAJC25Q9H1X3 360 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 CTAGE5O15320 804 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 TTLL5Q6EMB2 1281 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 FAM196AQ6ZSG2 479 aa14.61□□□□□ -0.07
BEST3-201ENST00000266661 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
BEST3-201ENST00000266661 DDX60Q8IY21 1712 aaKnown RBP14.6□□□□□ -0.07
BEST3-201ENST00000266661 DNTTIP2Q5QJE6 756 aaKnown RBP14.6□□□□□ -0.07
BEST3-201ENST00000266661 CCDC186Q7Z3E2 898 aa14.6□□□□□ -0.07
BEST3-201ENST00000266661 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
BEST3-201ENST00000266661 PLA2G12BQ9BX93 195 aa14.6□□□□□ -0.07
BEST3-201ENST00000266661 ZBTB3Q9H5J0 574 aa14.6□□□□□ -0.07
BEST3-201ENST00000266661 NCOA5Q9HCD5 579 aaKnown RBP14.6□□□□□ -0.07
BEST3-201ENST00000266661 NRBP1Q9UHY1 535 aa14.6□□□□□ -0.07
BEST3-201ENST00000266661 BTAF1O14981 1849 aa14.6□□□□□ -0.07
BEST3-201ENST00000266661 CSF1RP07333 972 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 CCT2P78371 535 aaKnown RBP14.59□□□□□ -0.07
BEST3-201ENST00000266661 TCIRG1Q13488 830 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 ABCC12Q96J65 1359 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 C11orf57Q6ZUT1 292 aaPredicted RBP14.59□□□□□ -0.07
BEST3-201ENST00000266661 UPF1Q92900 1129 aaKnown RBP eCLIP14.59□□□□□ -0.07
BEST3-201ENST00000266661 ZNF396Q96N95 335 aaPredicted RBP14.59□□□□□ -0.07
BEST3-201ENST00000266661 CEP126Q9P2H0 1117 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 KIF3AQ9Y496 699 aa14.59□□□□□ -0.07
BEST3-201ENST00000266661 TNS1Q9HBL0 1735 aaKnown RBP14.59□□□□□ -0.07
BEST3-201ENST00000266661 ADORA1P30542 326 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 FGD1P98174 961 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 LRMPQ12912 555 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 MB21D2Q8IYB1 491 aaPredicted RBP14.58□□□□□ -0.08
BEST3-201ENST00000266661 TSC1Q92574 1164 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 CHMP4CQ96CF2 233 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 GPHNQ9NQX3 736 aaPredicted RBP14.58□□□□□ -0.08
BEST3-201ENST00000266661 RTEL1Q9NZ71 1219 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 HPS5Q9UPZ3 1129 aa14.58□□□□□ -0.08
BEST3-201ENST00000266661 ZFYP08048 801 aaPredicted RBP14.57□□□□□ -0.08
BEST3-201ENST00000266661 FAM160A1Q05DH4 1040 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 SCARF1Q14162 830 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CCDC144BQ3MJ40 725 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 DEFB132Q7Z7B7 95 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CCDC144CPQ8IYA2 1237 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 FMR1NBQ8N0W7 255 aaPredicted RBP14.57□□□□□ -0.08
BEST3-201ENST00000266661 XAGE2Q96GT9 111 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 NHSQ6T4R5 1651 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CTIFO43310 598 aaKnown RBP14.57□□□□□ -0.08
BEST3-201ENST00000266661 PCCAP05165 728 aaPredicted RBP14.57□□□□□ -0.08
BEST3-201ENST00000266661 NEDD4P46934 1319 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 ANTXR2P58335 489 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CEBPZQ03701 1054 aaKnown RBP14.57□□□□□ -0.08
BEST3-201ENST00000266661 STX1AQ16623 288 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CHST3Q7LGC8 479 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 RGS22Q8NE09 1264 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CACTINQ8WUQ7 758 aaKnown RBP14.57□□□□□ -0.08
BEST3-201ENST00000266661 MRFAP1L1Q96HT8 127 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 CTNNA3Q9UI47 895 aa14.57□□□□□ -0.08
BEST3-201ENST00000266661 RIC1Q4ADV7 1423 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 WDR19Q8NEZ3 1342 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 FGAP02671 866 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 DHX40Q8IX18 779 aaKnown RBP14.56□□□□□ -0.08
BEST3-201ENST00000266661 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
BEST3-201ENST00000266661 RIOK3O14730 519 aaKnown RBP14.55□□□□□ -0.08
BEST3-201ENST00000266661 KCNQ4P56696 695 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 LINC00301Q8NCQ3 95 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 APPBP2Q92624 585 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 PCDHA7Q9UN72 937 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 FOSBP53539 338 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 CCDC57Q2TAC2 916 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 CCDC158Q5M9N0 1113 aa14.55□□□□□ -0.08
BEST3-201ENST00000266661 ADALQ6DHV7 355 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms