RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 ZNF532Q9HCE3 1301 aa28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 NLRP3Q96P20 1036 aa28.52■■■□□ 2.16
TSPAN13-201ENST00000262067 LRRC2Q9BYS8 371 aa28.52■■■□□ 2.16
TSPAN13-201ENST00000262067 KLHL40Q2TBA0 621 aa28.52■■■□□ 2.16
TSPAN13-201ENST00000262067 COL24A1Q17RW2 1714 aa28.51■■■□□ 2.15
TSPAN13-201ENST00000262067 TCRBV5S4A2TA0A5A2 114 aa28.51■■■□□ 2.15
TSPAN13-201ENST00000262067 EXOSC10Q01780 885 aaKnown RBP28.51■■■□□ 2.15
TSPAN13-201ENST00000262067 STK3Q13188 491 aa28.51■■■□□ 2.15
TSPAN13-201ENST00000262067 MINPP1Q9UNW1 487 aa28.51■■■□□ 2.15
TSPAN13-201ENST00000262067 WTIPA6NIX2 430 aaPredicted RBP28.5■■■□□ 2.15
TSPAN13-201ENST00000262067 ZSCAN22P10073 491 aaPredicted RBP28.5■■■□□ 2.15
TSPAN13-201ENST00000262067 TAF1P21675 1872 aa28.5■■■□□ 2.15
TSPAN13-201ENST00000262067 MYO5AQ9Y4I1 1855 aaKnown RBP28.5■■■□□ 2.15
TSPAN13-201ENST00000262067 IMMTQ16891 758 aaKnown RBP28.49■■■□□ 2.15
TSPAN13-201ENST00000262067 BRF1Q92994 677 aa28.49■■■□□ 2.15
TSPAN13-201ENST00000262067 HAND2P61296 217 aa28.49■■■□□ 2.15
TSPAN13-201ENST00000262067 FOXD4L6Q3SYB3 417 aaPredicted RBP28.49■■■□□ 2.15
TSPAN13-201ENST00000262067 FOXD4L3Q6VB84 417 aaPredicted RBP28.49■■■□□ 2.15
TSPAN13-201ENST00000262067 CASZ1Q86V15 1759 aa28.49■■■□□ 2.15
TSPAN13-201ENST00000262067 UBE4AQ14139 1066 aa28.48■■■□□ 2.15
TSPAN13-201ENST00000262067 RPS8P62241 208 aaKnown RBP28.47■■■□□ 2.15
TSPAN13-201ENST00000262067 FGD1P98174 961 aa28.47■■■□□ 2.15
TSPAN13-201ENST00000262067 MAP3K12Q12852 859 aa28.47■■■□□ 2.15
TSPAN13-201ENST00000262067 KRT27Q7Z3Y8 459 aa28.47■■■□□ 2.15
TSPAN13-201ENST00000262067 LAMA4Q16363 1823 aa28.47■■■□□ 2.15
TSPAN13-201ENST00000262067 C4AP0C0L4 1744 aa28.46■■■□□ 2.15
TSPAN13-201ENST00000262067 MAGEB6Q8N7X4 407 aa28.46■■■□□ 2.15
TSPAN13-201ENST00000262067 GYG1P46976 350 aa28.46■■■□□ 2.15
TSPAN13-201ENST00000262067 GTF3C6Q969F1 213 aa28.46■■■□□ 2.15
TSPAN13-201ENST00000262067 AGXT2Q9BYV1 514 aa28.46■■■□□ 2.15
TSPAN13-201ENST00000262067 MTMR6Q9Y217 621 aa28.46■■■□□ 2.15
TSPAN13-201ENST00000262067 NFIXQ14938 502 aa28.45■■■□□ 2.14
TSPAN13-201ENST00000262067 IQSEC3Q9UPP2 1182 aaPredicted RBP28.45■■■□□ 2.14
TSPAN13-201ENST00000262067 ZNF804BA4D1E1 1349 aa28.45■■■□□ 2.14
TSPAN13-201ENST00000262067 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 FSD2A1L4K1 749 aa28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 F13A1P00488 732 aa28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 CHST3Q7LGC8 479 aa28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 STRBPQ96SI9 672 aaKnown RBP28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 TRIM37O94972 964 aa28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 ADRA2BP18089 450 aa28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 TM4SF1P30408 202 aa28.44■■■□□ 2.14
TSPAN13-201ENST00000262067 GOLGA6L3A6NEY3 463 aa28.43■■■□□ 2.14
TSPAN13-201ENST00000262067 ZNF213O14771 459 aa28.43■■■□□ 2.14
TSPAN13-201ENST00000262067 NCLP19338 710 aaKnown RBP28.43■■■□□ 2.14
TSPAN13-201ENST00000262067 GPT2Q8TD30 523 aa28.43■■■□□ 2.14
TSPAN13-201ENST00000262067 AIDAQ96BJ3 306 aa28.43■■■□□ 2.14
TSPAN13-201ENST00000262067 NPHP1O15259 732 aa28.42■■■□□ 2.14
TSPAN13-201ENST00000262067 APOBRQ0VD83 1088 aa28.42■■■□□ 2.14
TSPAN13-201ENST00000262067 LARP1BQ659C4 914 aaKnown RBP28.42■■■□□ 2.14
TSPAN13-201ENST00000262067 CARMIL3Q8ND23 1372 aa28.42■■■□□ 2.14
TSPAN13-201ENST00000262067 A0A1B0GUL6 1792 aa28.42■■■□□ 2.14
TSPAN13-201ENST00000262067 APPP05067 770 aa28.42■■■□□ 2.14
TSPAN13-201ENST00000262067 GNL3LQ9NVN8 582 aaKnown RBP28.41■■■□□ 2.14
TSPAN13-201ENST00000262067 DOCK2Q92608 1830 aa28.41■■■□□ 2.14
TSPAN13-201ENST00000262067 PFKFB2O60825 505 aa28.41■■■□□ 2.14
TSPAN13-201ENST00000262067 SLC27A3Q5K4L6 730 aa28.41■■■□□ 2.14
TSPAN13-201ENST00000262067 VPS37CA5D8V6 355 aaPredicted RBP28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 SCRN1Q12765 414 aa28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 CAVIN4Q5BKX8 364 aa28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 FAM84BQ96KN1 310 aaPredicted RBP28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 GDPD2Q9HCC8 539 aa28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 LRP2BPQ9P2M1 347 aa28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 BRWD3Q6RI45 1802 aa28.4■■■□□ 2.14
TSPAN13-201ENST00000262067 MBD4O95243 580 aa28.39■■■□□ 2.14
TSPAN13-201ENST00000262067 NBPF3Q9H094 633 aa28.39■■■□□ 2.14
TSPAN13-201ENST00000262067 JAK2O60674 1132 aa28.39■■■□□ 2.13
TSPAN13-201ENST00000262067 L1TD1Q5T7N2 865 aaKnown RBP28.39■■■□□ 2.13
TSPAN13-201ENST00000262067 MB21D2Q8IYB1 491 aaPredicted RBP28.39■■■□□ 2.13
TSPAN13-201ENST00000262067 PDCP20941 246 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 CAVIN1Q6NZI2 390 aaKnown RBP28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 FBXL16Q8N461 479 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 ARMT1Q9H993 441 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 VPS37DQ86XT2 251 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 CNBD1Q8NA66 436 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 NCOA7Q8NI08 942 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 NSFL1CQ9UNZ2 370 aaKnown RBP28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 ATP6V1DQ9Y5K8 247 aa28.38■■■□□ 2.13
TSPAN13-201ENST00000262067 PATL2C9JE40 543 aaKnown RBP28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 PDIA4P13667 645 aaKnown RBP28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 KLRK1P26718 216 aa28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 USP48Q86UV5 1035 aa28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 ANKRD2Q9GZV1 360 aa28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 GPHNQ9NQX3 736 aaPredicted RBP28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 CNPY2Q9Y2B0 182 aa28.37■■■□□ 2.13
TSPAN13-201ENST00000262067 GYS1P13807 737 aa28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 ALX1Q15699 326 aa28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 FBXO33Q7Z6M2 555 aa28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 COL1A1P02452 1464 aaPredicted RBP28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 TNRC6CQ9HCJ0 1690 aaKnown RBP28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 PRC1O43663 620 aa28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 MCM5P33992 734 aa28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 ABCF2Q9UG63 623 aa28.36■■■□□ 2.13
TSPAN13-201ENST00000262067 ANTXR2P58335 489 aa28.35■■■□□ 2.13
TSPAN13-201ENST00000262067 CDC37L1Q7L3B6 337 aa28.35■■■□□ 2.13
TSPAN13-201ENST00000262067 RALYLQ86SE5 291 aaKnown RBP28.35■■■□□ 2.13
TSPAN13-201ENST00000262067 GAS2L3Q86XJ1 694 aa28.35■■■□□ 2.13
TSPAN13-201ENST00000262067 TBC1D10CQ8IV04 446 aa28.35■■■□□ 2.13
TSPAN13-201ENST00000262067 ZNF274Q96GC6 653 aaPredicted RBP28.35■■■□□ 2.13
TSPAN13-201ENST00000262067 EPB41L4AQ9HCS5 686 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms