RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 C6orf163Q5TEZ5 329 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 CAPRIN2Q6IMN6 1127 aaKnown RBP12.11□□□□□ -0.47
KPNA3-201ENST00000261667 KLHL10Q6JEL2 608 aa12.11□□□□□ -0.47
KPNA3-201ENST00000261667 SCP2P22307 547 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 E7EVH7 732 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 FYB1O15117 783 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 ETF1P62495 437 aaKnown RBP12.1□□□□□ -0.47
KPNA3-201ENST00000261667 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 CACNA2D3Q8IZS8 1091 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
KPNA3-201ENST00000261667 SH2B1Q9NRF2 756 aaPredicted RBP12.1□□□□□ -0.47
KPNA3-201ENST00000261667 STIM2Q9P246 746 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
KPNA3-201ENST00000261667 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
KPNA3-201ENST00000261667 GBP1P32455 592 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 ACRBPQ8NEB7 543 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 VCX3BQ9H321 246 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 FAM169AQ9Y6X4 670 aa12.1□□□□□ -0.47
KPNA3-201ENST00000261667 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 CA8P35219 290 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 SPTLC3Q9NUV7 552 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 ANAPC4Q9UJX5 808 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 RAB11FIP4Q86YS3 637 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 KIF2CQ99661 725 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 EGFL6Q8IUX8 553 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 DISP3Q9P2K9 1392 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 HIP1RO75146 1068 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 YEATS4O95619 227 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 IFT88Q13099 833 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
KPNA3-201ENST00000261667 GCFC2P16383 781 aaKnown RBP12.08□□□□□ -0.48
KPNA3-201ENST00000261667 SF3A3Q12874 501 aaKnown RBP eCLIP12.08□□□□□ -0.48
KPNA3-201ENST00000261667 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 CCDC40Q4G0X9 1142 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 SMIM23A6NLE4 172 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 USO1O60763 962 aaKnown RBP12.08□□□□□ -0.48
KPNA3-201ENST00000261667 VAV2P52735 878 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 SH3BGRP55822 239 aaPredicted RBP12.08□□□□□ -0.48
KPNA3-201ENST00000261667 ZBTB10Q96DT7 871 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 ST5P78524 1137 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 FBXW10Q5XX13 1052 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 PAF1Q8N7H5 531 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 NRBP1Q9UHY1 535 aa12.08□□□□□ -0.48
KPNA3-201ENST00000261667 CWC27Q6UX04 472 aaKnown RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 NAP1L3Q99457 506 aaPredicted RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 SLC30A9Q6PML9 568 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 RNF10Q8N5U6 811 aaKnown RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 CHAMP1Q96JM3 812 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 FAM210AQ96ND0 272 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 SELENOSQ9BQE4 189 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 CARD10Q9BWT7 1032 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 PPANQ9NQ55 473 aaKnown RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 POLKQ9UBT6 870 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 ADGRF5Q8IZF2 1346 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 PPP1R12BO60237 982 aaPredicted RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 SURF6O75683 361 aaKnown RBP12.07□□□□□ -0.48
KPNA3-201ENST00000261667 RMI1Q9H9A7 625 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 ATP1A2P50993 1020 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 NUCB1Q02818 461 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 LRRC8AQ8IWT6 810 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 EHBP1Q8NDI1 1231 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
KPNA3-201ENST00000261667 PPFIA2O75334 1257 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 PKP1Q13835 747 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 BAG1Q99933 345 aaPredicted RBP12.06□□□□□ -0.48
KPNA3-201ENST00000261667 FSD1Q9BTV5 496 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 NPHP3Q7Z494 1330 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 RNF40O75150 1001 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 GNAI1P63096 354 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 FKBP15Q5T1M5 1219 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 RABGGTAQ92696 567 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 KCNG1Q9UIX4 513 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 IFT81Q8WYA0 676 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
KPNA3-201ENST00000261667 VIMP08670 466 aaKnown RBP12.05□□□□□ -0.48
KPNA3-201ENST00000261667 TMED1Q13445 227 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 DDX46Q7L014 1031 aaKnown RBP12.05□□□□□ -0.48
KPNA3-201ENST00000261667 EPS15P42566 896 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 MUM1Q2TAK8 710 aa12.05□□□□□ -0.48
KPNA3-201ENST00000261667 SND1Q7KZF4 910 aaKnown RBP eCLIP12.05□□□□□ -0.48
KPNA3-201ENST00000261667 CACTINQ8WUQ7 758 aaKnown RBP12.05□□□□□ -0.48
KPNA3-201ENST00000261667 HGSO14964 777 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms