RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 NLRP12P59046 1061 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 FKBP15Q5T1M5 1219 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 RRAGBQ5VZM2 374 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 ATRIPQ8WXE1 791 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 CTAGE1Q96RT6 745 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 ZHX3Q9H4I2 956 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 ZEB2O60315 1214 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 LRP2BPQ9P2M1 347 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 TRIM21P19474 475 aaKnown RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 TFCP2Q12800 502 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 TDRD12Q587J7 1177 aaKnown RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 PAG1Q9NWQ8 432 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 KIAA0232Q92628 1395 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 MTIF2P46199 727 aaKnown RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 CLCN6P51797 869 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 CKAP4Q07065 602 aaKnown RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 NAA16Q6N069 864 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 KRT28Q7Z3Y7 464 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 MAATS1Q7Z4T9 603 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 MYOM2P54296 1465 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 A0A0D9SFI3 127 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 SSBP05455 408 aaKnown RBP eCLIP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 CT47A1Q5JQC4 288 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 OTUD6BQ8N6M0 293 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.48■□□□□ 0.55
SREBF1-201ENST00000261646 ABCF2Q9UG63 623 aa18.48■□□□□ 0.55
SREBF1-201ENST00000261646 EFCAB8A8MWE9 144 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 ZNF853P0CG23 659 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 NFE2L3Q9Y4A8 694 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 KAT6BQ8WYB5 2073 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 TUBBP07437 444 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 ADKP55263 362 aaKnown RBP18.47■□□□□ 0.55
SREBF1-201ENST00000261646 TUBB4BP68371 445 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 PPP1R13BQ96KQ4 1090 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 DESI2Q9BSY9 194 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 ZFYVE16Q7Z3T8 1539 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 HSF2BPO75031 334 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 IGSF22Q8N9C0 903 aa18.47■□□□□ 0.55
SREBF1-201ENST00000261646 KMT5BQ4FZB7 885 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 SPECC1Q5M775 1068 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 TICAM2Q86XR7 235 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 AKR1B10O60218 316 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 GPTP24298 496 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 NBPF6Q5VWK0 638 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 ZNF710Q8N1W2 664 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 NBPF4Q96M43 638 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 EHBP1Q8NDI1 1231 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 FAM76AQ8TAV0 307 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
SREBF1-201ENST00000261646 PSDA5PKW4 1024 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-201ENST00000261646 KRT18P05783 430 aaKnown RBP18.45■□□□□ 0.54
SREBF1-201ENST00000261646 FTOQ9C0B1 505 aaKnown RBP eCLIP18.45■□□□□ 0.541e-6■■■■■ 30.7
SREBF1-201ENST00000261646 MAP3K5Q99683 1374 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 PPM1EQ8WY54 764 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 GDAP1L1Q96MZ0 367 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 DBNDD2Q9BQY9 259 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 KCNF1Q9H3M0 494 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 ADALQ6DHV7 355 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 CEP57Q86XR8 500 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 KCNH3Q9ULD8 1083 aa18.45■□□□□ 0.54
SREBF1-201ENST00000261646 PNMA6AP0CW24 399 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-201ENST00000261646 CCT6AP40227 531 aaKnown RBP18.44■□□□□ 0.54
SREBF1-201ENST00000261646 SPAG1Q07617 926 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
SREBF1-201ENST00000261646 TRIM47Q96LD4 638 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 ZCCHC11Q5TAX3 1644 aaKnown RBP18.44■□□□□ 0.54
SREBF1-201ENST00000261646 CYLC1P35663 651 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-201ENST00000261646 CCDC96Q2M329 555 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 ALS2CR12Q96Q35 445 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 CCDC113Q9H0I3 377 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 IFFO1Q0D2I5 559 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 TRMT44Q8IYL2 757 aaKnown RBP18.44■□□□□ 0.54
SREBF1-201ENST00000261646 PRDM4Q9UKN5 801 aa18.44■□□□□ 0.54
SREBF1-201ENST00000261646 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
SREBF1-201ENST00000261646 GCP02774 474 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 TIMM10P62072 90 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 CCDC144BQ3MJ40 725 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 KRI1Q8N9T8 703 aaKnown RBP18.43■□□□□ 0.54
SREBF1-201ENST00000261646 EAF2Q96CJ1 260 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-201ENST00000261646 ORAI2Q96SN7 254 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 NAPGQ99747 312 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-201ENST00000261646 PPP2R2CQ9Y2T4 447 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 CNGA4Q8IV77 575 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 PCDHA7Q9UN72 937 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 OPA1O60313 960 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 CDC25BP30305 580 aa18.43■□□□□ 0.54
SREBF1-201ENST00000261646 KRT86O43790 486 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 DPCR1Q3MIW9 517 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 CCDC178Q5BJE1 867 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 GOLGA8FQ08AF8 430 aa18.42■□□□□ 0.54
SREBF1-201ENST00000261646 GOLGA8DPQ0D2H9 430 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms