RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ADAM21Q9UKJ8 722 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 NEDD4P46934 1319 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 PLEKHG1Q9ULL1 1385 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 LTN1O94822 1766 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 CCDC151A5D8V7 595 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 VWA3AA6NCI4 1184 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 ANXA1P04083 346 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 ATP5JP18859 108 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
TROAP-201ENST00000257909 SRLQ86TD4 932 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 LINS1Q8NG48 757 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 SUCLG2Q96I99 432 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 BICC1Q9H694 974 aaKnown RBP13.29□□□□□ -0.28
TROAP-201ENST00000257909 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 PPP2R2CQ9Y2T4 447 aa13.29□□□□□ -0.28
TROAP-201ENST00000257909 ZNF202O95125 648 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 SERPINC1P01008 464 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 IVLP07476 585 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 ACTN2P35609 894 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 BRD3Q15059 726 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 C10orf67Q8IYJ2 551 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 GOLGA1Q92805 767 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 ZNF274Q96GC6 653 aaPredicted RBP13.28□□□□□ -0.28
TROAP-201ENST00000257909 PARD6BQ9BYG5 372 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 CARMIL3Q8ND23 1372 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 RGPD2P0DJD1 1756 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 BIN1O00499 593 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 SPTLC2O15270 562 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 TOP1P11387 765 aaKnown RBP13.28□□□□□ -0.28
TROAP-201ENST00000257909 LMAN1P49257 510 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
TROAP-201ENST00000257909 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
TROAP-201ENST00000257909 VSTM4Q8IW00 320 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
TROAP-201ENST00000257909 SETD1BQ9UPS6 1966 aaKnown RBP13.27□□□□□ -0.28
TROAP-201ENST00000257909 GNG11P61952 73 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
TROAP-201ENST00000257909 EXOSC10Q01780 885 aaKnown RBP13.27□□□□□ -0.29
TROAP-201ENST00000257909 GUCY1B3Q02153 619 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.29
TROAP-201ENST00000257909 LEKR1Q6ZMV7 388 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 ZNF609O15014 1411 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 TXLNAP40222 546 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 MYL5Q02045 173 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 STOX1Q6ZVD7 989 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 HSD3B7Q9H2F3 369 aa13.27□□□□□ -0.29
TROAP-201ENST00000257909 MAP2K7O14733 419 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 ATP1A3P13637 1013 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 CMA1P23946 247 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 NOP2P46087 812 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 LONRF2Q1L5Z9 754 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 BRAPQ7Z569 592 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 MSL3Q8N5Y2 521 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 EPC1Q9H2F5 836 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 ATG3Q9NT62 314 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 RRP15Q9Y3B9 282 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 PDIA3P30101 505 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 TEFQ10587 303 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 HNRNPLLQ8WVV9 542 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
TROAP-201ENST00000257909 YY1AP1Q9H869 796 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 TUBE1Q9UJT0 475 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
TROAP-201ENST00000257909 SH3TC1Q8TE82 1336 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 TRIM66O15016 1216 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 STX10O60499 249 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
TROAP-201ENST00000257909 NLRP6P59044 892 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 CCDC129Q6ZRS4 1044 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 TMEM139Q8IV31 216 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
TROAP-201ENST00000257909 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
TROAP-201ENST00000257909 LCMT1Q9UIC8 334 aa13.25□□□□□ -0.29
TROAP-201ENST00000257909 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 KCNQ3O43525 872 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
TROAP-201ENST00000257909 TUBB4BP68371 445 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 WDR24Q96S15 920 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 BAG1Q99933 345 aaPredicted RBP13.24□□□□□ -0.29
TROAP-201ENST00000257909 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 PFKFB1P16118 471 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 SYNE3Q6ZMZ3 975 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 DPF2Q92785 391 aa13.24□□□□□ -0.29
TROAP-201ENST00000257909 RPS6KA5O75582 802 aa13.23□□□□□ -0.29
TROAP-201ENST00000257909 EIF3JO75822 258 aaKnown RBP13.23□□□□□ -0.29
TROAP-201ENST00000257909 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
TROAP-201ENST00000257909 MYSM1Q5VVJ2 828 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms