RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PZPP20742 1482 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 HSF2BPO75031 334 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 SPECC1Q5M775 1068 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 CCHCR1Q8TD31 782 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 PPP1R14BQ96C90 147 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 NSRP1Q9H0G5 558 aaKnown RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 NUP62CLQ9H1M0 184 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 ZHX3Q9H4I2 956 aa7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 MAGEC2Q9UBF1 373 aaPredicted RBP7.63□□□□□ -1.19
PDGFRA-201ENST00000257290 BRD1O95696 1058 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 ZNF131P52739 623 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 KIF4BQ2VIQ3 1234 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 SLC4A8Q2Y0W8 1093 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 TCERG1LQ5VWI1 586 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC155Q8N6L0 562 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 CLUAP1Q96AJ1 413 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 RRP7AQ9Y3A4 280 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 GCOM1H8Y6P7 765 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 APAF1O14727 1248 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 ERCC5P28715 1186 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 KIF11P52732 1056 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 KRT72Q14CN4 511 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 ANKRD45Q5TZF3 282 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 FAM81AQ8TBF8 368 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 SIRT1Q96EB6 747 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 CEP63Q96MT8 703 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 TBC1D32Q96NH3 1257 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 MTRQ99707 1265 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 CNGB3Q9NQW8 809 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 MYO5CQ9NQX4 1742 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 RBM47A0AV96 593 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 RASSF10A6NK89 507 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 PSME1Q06323 249 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 SLFNL1Q499Z3 407 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 PNMA8AQ86V59 439 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 MFN1Q8IWA4 741 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 NRDE2Q9H7Z3 1164 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 ECEL1O95672 775 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 MAP4K4O95819 1239 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 C6orf163Q5TEZ5 329 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 APLFQ8IW19 511 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 MMADHCQ9H3L0 296 aaPredicted RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 NEO1Q92859 1461 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 PARP1P09874 1014 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 NEK1Q96PY6 1258 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 IWS1Q96ST2 819 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 NACA2Q9H009 215 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 POLKQ9UBT6 870 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 ERBB3P21860 1342 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 IQCA1LA6NCM1 817 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 VIL1P09327 827 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 RAB3GAP1Q15042 981 aa7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 MAK16Q9BXY0 300 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 RANBP17Q9H2T7 1088 aaKnown RBP7.62□□□□□ -1.19
PDGFRA-201ENST00000257290 GPRASP1Q5JY77 1395 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CLTAP09496 248 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 NCBP1Q09161 790 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ANKLE2Q86XL3 938 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 SPDYE1Q8NFV5 336 aaPredicted RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 FAM71BQ8TC56 605 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 GGNBP2Q9H3C7 697 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC189A1A4V9 331 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TMCC1O94876 653 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 RPS6KA3P51812 740 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 SPATA21Q7Z572 469 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 SMARCC2Q8TAQ2 1214 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 PRAG1Q86YV5 1406 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 H0YC42 278 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ZEB2O60315 1214 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TPD52P55327 224 aaPredicted RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ARHGAP18Q8N392 663 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 C17orf53Q8N3J3 647 aaPredicted RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC63Q8NA47 563 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 RPGRIP1Q96KN7 1286 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ZNF215Q9UL58 517 aaPredicted RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CARD8Q9Y2G2 431 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TRIM17Q9Y577 477 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 FIBPO43427 364 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 FOSL1P15407 271 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TMEM110Q86TL2 294 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 C14orf93Q9H972 538 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CEP126Q9P2H0 1117 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 COG6Q9Y2V7 657 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ZNF711Q9Y462 761 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ATF3P18847 181 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CCT5P48643 541 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TMED10P49755 219 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ZC3H6P61129 1189 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 BRD3Q15059 726 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 CDC37Q16543 378 aaPredicted RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 NUTM2GQ5VZR2 741 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TRIM68Q6AZZ1 485 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 TAOK1Q7L7X3 1001 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 LRRC43Q8N309 656 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 RNF10Q8N5U6 811 aaKnown RBP7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 SCOCQ9UIL1 159 aa7.61□□□□□ -1.19
PDGFRA-201ENST00000257290 ADGRF5Q8IZF2 1346 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 IMPDH2P12268 514 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 FERP16591 822 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms