RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 IQCA1LA6NCM1 817 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 MBD3O95983 291 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 CIAPIN1Q6FI81 312 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 AOX1Q06278 1338 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 KDM2BQ8NHM5 1336 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 BMP15O95972 392 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 C6orf50Q9HD87 102 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 TTF2Q9UNY4 1162 aaKnown RBP10.67□□□□□ -0.7
PDE6A-201ENST00000255266 COL15A1P39059 1388 aa10.67□□□□□ -0.7
PDE6A-201ENST00000255266 CALML4Q96GE6 196 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 TSG101Q99816 390 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 VAT1LQ9HCJ6 419 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 POTEJP0CG39 1038 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 GTF2IP78347 998 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 CEP85Q6P2H3 762 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 SPATA5Q8NB90 893 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 TECPR2O15040 1411 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 GRAPQ13588 217 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 GRAPLQ8TC17 118 aaPredicted RBP10.66□□□□□ -0.7
PDE6A-201ENST00000255266 PDCL3Q9H2J4 239 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 PA2G4Q9UQ80 394 aaKnown RBP10.66□□□□□ -0.7
PDE6A-201ENST00000255266 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 AMPD3Q01432 767 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDE6A-201ENST00000255266 KIF1AQ12756 1690 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 PTPRUQ92729 1446 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 ZNF804BA4D1E1 1349 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 SPDYE3A6NKU9 549 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 NBPF7P0C2Y1 421 aaPredicted RBP10.66□□□□□ -0.7
PDE6A-201ENST00000255266 ME1P48163 572 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 MFSD14BQ5SR56 506 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 SMARCE1Q969G3 411 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
PDE6A-201ENST00000255266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
PDE6A-201ENST00000255266 BMP2KLQ5H9B9 411 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 TANGO6Q9C0B7 1094 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 SPC25Q9HBM1 224 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 USP40Q9NVE5 1235 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 FGFR1OPO95684 399 aaKnown RBP10.65□□□□□ -0.7
PDE6A-201ENST00000255266 PARP1P09874 1014 aaKnown RBP10.65□□□□□ -0.7
PDE6A-201ENST00000255266 OSBPP22059 807 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 NUCB1Q02818 461 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 RTN1Q16799 776 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 TTLL5Q6EMB2 1281 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 SAMM50Q9Y512 469 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 RAB3GAP1Q15042 981 aa10.65□□□□□ -0.7
PDE6A-201ENST00000255266 SMCR8Q8TEV9 937 aaPredicted RBP10.65□□□□□ -0.7
PDE6A-201ENST00000255266 GZF1Q9H116 711 aaPredicted RBP10.65□□□□□ -0.7
PDE6A-201ENST00000255266 LUC7LQ9NQ29 371 aaKnown RBP10.65□□□□□ -0.7
PDE6A-201ENST00000255266 ZBTB43O43298 467 aa10.65□□□□□ -0.71
PDE6A-201ENST00000255266 KRT24Q2M2I5 525 aa10.65□□□□□ -0.71
PDE6A-201ENST00000255266 SUCLG2Q96I99 432 aa10.65□□□□□ -0.71
PDE6A-201ENST00000255266 TCP11L1Q9NUJ3 509 aa10.65□□□□□ -0.71
PDE6A-201ENST00000255266 CALML3P27482 149 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 SLC4A8Q2Y0W8 1093 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
PDE6A-201ENST00000255266 CIAO1O76071 339 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 ZBTB7AO95365 584 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 IREB2P48200 963 aaKnown RBP10.64□□□□□ -0.71
PDE6A-201ENST00000255266 TTLL7Q6ZT98 887 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 ARPP21Q9UBL0 812 aaPredicted RBP10.64□□□□□ -0.71
PDE6A-201ENST00000255266 ERFEQ4G0M1 354 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 TMED8Q6PL24 325 aaPredicted RBP10.64□□□□□ -0.71
PDE6A-201ENST00000255266 MIGA1Q8NAN2 632 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 DRC1Q96MC2 740 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 MBD4O95243 580 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 C2orf69Q8N8R5 385 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 CCDC171Q6TFL3 1326 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 PDE1AP54750 535 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 MST1RQ04912 1400 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 PAF1Q8N7H5 531 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 ATG3Q9NT62 314 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
PDE6A-201ENST00000255266 CCNA1P78396 465 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 DHX37Q8IY37 1157 aaKnown RBP10.63□□□□□ -0.71
PDE6A-201ENST00000255266 CKAP2LQ8IYA6 745 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDE6A-201ENST00000255266 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 CPDO75976 1380 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 DKC1O60832 514 aaKnown RBP eCLIP10.63□□□□□ -0.71
PDE6A-201ENST00000255266 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 ABT1Q9ULW3 272 aaKnown RBP10.63□□□□□ -0.71
PDE6A-201ENST00000255266 TAF5LO75529 589 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 GNA11P29992 359 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 HAND2P61296 217 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 R3HDM1Q15032 1099 aaKnown RBP10.63□□□□□ -0.71
PDE6A-201ENST00000255266 G2E3Q7L622 706 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 COA1Q9GZY4 146 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 SAP30BPQ9UHR5 308 aaKnown RBP10.63□□□□□ -0.71
PDE6A-201ENST00000255266 NAPAP54920 295 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 CHRNDQ07001 517 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 DCTPP1Q9H773 170 aa10.63□□□□□ -0.71
PDE6A-201ENST00000255266 TMEM131LA2VDJ0 1609 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
PDE6A-201ENST00000255266 USP14P54578 494 aa10.62□□□□□ -0.71
PDE6A-201ENST00000255266 APPBP2Q92624 585 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms