RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZYXQ15942 572 aaKnown RBP21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 MCM6Q14566 821 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 FLT4P35916 1363 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 PLCH2O75038 1416 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 B4E1Z4 1266 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 ARL1P40616 181 aaPredicted RBP21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 GNAQP50148 359 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 GPIHBP1Q8IV16 184 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 LZTFL1Q9NQ48 299 aa21.22■□□□□ 0.99
SMARCC1-201ENST00000254480 FAM13AO94988 1023 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 MPHOSPH6Q99547 160 aaKnown RBP21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 UBXN1Q04323 297 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 PPP1R14CQ8TAE6 165 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 CYLC1P35663 651 aaPredicted RBP21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 KRT79Q5XKE5 535 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 FAM200AQ8TCP9 573 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 ARMT1Q9H993 441 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 FAM170AA1A519 330 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 SMIM23A6NLE4 172 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 IKBKGQ9Y6K9 419 aa21.21■□□□□ 0.99
SMARCC1-201ENST00000254480 A0A1B0GVL5 298 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 A0A1W2PRG0 241 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 VWA3AA6NCI4 1184 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 TAF5LO75529 589 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 PRDM1O75626 825 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 HARSP12081 509 aaKnown RBP21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 TYRO3Q06418 890 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 UVSSAQ2YD98 709 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 MAP3K19Q56UN5 1328 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 RUFY3Q7L099 469 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 DCTPP1Q9H773 170 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 CHMLP26374 656 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 ASXL2Q76L83 1435 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 CHMP2AO43633 222 aa21.2■□□□□ 0.98
SMARCC1-201ENST00000254480 STAMBPO95630 424 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 LETM2Q2VYF4 491 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 PUS7Q96PZ0 661 aaKnown RBP21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 WDR70Q9NW82 654 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 ZHX1Q9UKY1 873 aaPredicted RBP21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 GUCA1BQ9UMX6 200 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 A0A1W2PP64 1363 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 GOLGA6L9A6NEM1 432 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 CCDC50Q8IVM0 306 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 NOLC1Q14978 699 aaKnown RBP eCLIP21.19■□□□□ 0.982e-10■■■■■ 52.1
SMARCC1-201ENST00000254480 CTAGE1Q96RT6 745 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 HSF2BPO75031 334 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 ITGA6P23229 1130 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 DCAF17Q5H9S7 520 aaPredicted RBP21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 JDP2Q8WYK2 163 aa21.19■□□□□ 0.98
SMARCC1-201ENST00000254480 XRCC6P12956 609 aaKnown RBP eCLIP21.18■□□□□ 0.981e-6■■■□□ 17.2
SMARCC1-201ENST00000254480 GSTA5Q7RTV2 222 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 OTUD6BQ8N6M0 293 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 NCOA5Q9HCD5 579 aaKnown RBP21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 IFNKQ9P0W0 207 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 ABCC1P33527 1531 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 A2MP01023 1474 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 MAP3K9P80192 1104 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 PLCB3Q01970 1234 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 FCHSD1Q86WN1 690 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 MAPK8IP1Q9UQF2 711 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 A0A1B0GUL7 405 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 BACH1O14867 736 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 ERCC3P19447 782 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 DHX32Q7L7V1 743 aaKnown RBP21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 CEP112Q8N8E3 955 aa21.18■□□□□ 0.98
SMARCC1-201ENST00000254480 BMP15O95972 392 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 UFL1O94874 794 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 ZBTB40Q9NUA8 1239 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 A1BGP04217 495 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 PRKG1Q13976 671 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 RTL9Q8NET4 1388 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 NPATQ14207 1427 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 CCT6AP40227 531 aaKnown RBP21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 GIMAP7Q8NHV1 300 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 CTAGE15A4D2H0 777 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 CTAGE8P0CG41 777 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 RAPGEF1Q13905 1077 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 IFI16Q16666 785 aaKnown RBP21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 CTAGE6Q86UF2 777 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 CTAGE4Q8IX94 777 aa21.17■□□□□ 0.98
SMARCC1-201ENST00000254480 PRAG1Q86YV5 1406 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 POTEB2H3BUK9 544 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 FAM173BQ6P4H8 233 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 FNBP4Q8N3X1 1017 aaPredicted RBP21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 OTUD7BQ6GQQ9 843 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 DTHD1Q6ZMT9 781 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 ZNF408Q9H9D4 720 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 PODXL2Q9NZ53 605 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 TRAPPC8Q9Y2L5 1435 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 CCDC172P0C7W6 258 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 ORAI2Q96SN7 254 aa21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 SOS1Q07889 1333 aaPredicted RBP21.16■□□□□ 0.98
SMARCC1-201ENST00000254480 TRAPPC3LQ5T215 181 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms