RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 FAM84BQ96KN1 310 aaPredicted RBP16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 TCEANC2Q96MN5 208 aa16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 TPCN1Q9ULQ1 816 aa16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 DDR1Q08345 913 aa16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
SNRNP27-201ENST00000244227 DOCK2Q92608 1830 aa16.41■□□□□ 0.22
SNRNP27-201ENST00000244227 NPHP1O15259 732 aa16.41■□□□□ 0.22
SNRNP27-201ENST00000244227 ME3Q16798 604 aa16.41■□□□□ 0.22
SNRNP27-201ENST00000244227 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
SNRNP27-201ENST00000244227 ZSCAN31Q96LW9 406 aaPredicted RBP16.41■□□□□ 0.22
SNRNP27-201ENST00000244227 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 FGAP02671 866 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 KLRK1P26718 216 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 GRAPQ13588 217 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 GRAPLQ8TC17 118 aaPredicted RBP16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 ANKRD2Q9GZV1 360 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 COL1A1P02452 1464 aaPredicted RBP16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 SH2B1Q9NRF2 756 aaPredicted RBP16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 IQSEC3Q9UPP2 1182 aaPredicted RBP16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
SNRNP27-201ENST00000244227 E7EWF7 191 aa16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 BRD1O95696 1058 aa16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 ANKRD1Q15327 319 aa16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 COL23A1Q86Y22 540 aaPredicted RBP16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
SNRNP27-201ENST00000244227 EXOSC10Q01780 885 aaKnown RBP16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 GBP4Q96PP9 640 aa16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 ST5P78524 1137 aa16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 CCDC83Q8IWF9 413 aa16.38■□□□□ 0.21
SNRNP27-201ENST00000244227 KLRG2A4D1S0 409 aaPredicted RBP16.37■□□□□ 0.21
SNRNP27-201ENST00000244227 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
SNRNP27-201ENST00000244227 Q6ZUG5 572 aa16.37■□□□□ 0.21
SNRNP27-201ENST00000244227 DHX32Q7L7V1 743 aaKnown RBP16.37■□□□□ 0.21
SNRNP27-201ENST00000244227 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
SNRNP27-201ENST00000244227 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
SNRNP27-201ENST00000244227 DDX11L8A8MPP1 907 aa16.36■□□□□ 0.21
SNRNP27-201ENST00000244227 DENND2AQ9ULE3 1009 aa16.36■□□□□ 0.21
SNRNP27-201ENST00000244227 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
SNRNP27-201ENST00000244227 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
SNRNP27-201ENST00000244227 LAMA4Q16363 1823 aa16.36■□□□□ 0.21
SNRNP27-201ENST00000244227 ZBTB22O15209 634 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 HAND2P61296 217 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 IMMTQ16891 758 aaKnown RBP16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 LRP2BPQ9P2M1 347 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 SEMA3EO15041 775 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 MBD4O95243 580 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 HIBADHP31937 336 aaKnown RBP16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 NBPF3Q9H094 633 aa16.35■□□□□ 0.21
SNRNP27-201ENST00000244227 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
SNRNP27-201ENST00000244227 ALX1Q15699 326 aa16.34■□□□□ 0.21
SNRNP27-201ENST00000244227 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
SNRNP27-201ENST00000244227 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
SNRNP27-201ENST00000244227 PATL2C9JE40 543 aaKnown RBP16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 DTNBO60941 627 aa16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 ADGRA1Q86SQ6 560 aa16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 NLGN1Q8N2Q7 840 aa16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 ARMT1Q9H993 441 aa16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 EPB41L4AQ9HCS5 686 aaPredicted RBP16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 ABCF2Q9UG63 623 aa16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 LEMD3Q9Y2U8 911 aa16.33■□□□□ 0.21
SNRNP27-201ENST00000244227 PNPLA7Q6ZV29 1317 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 ZNF213O14771 459 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 TRAK2O60296 914 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 LCORLQ8N3X6 602 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 BRF1Q92994 677 aa16.33■□□□□ 0.2
SNRNP27-201ENST00000244227 XDHP47989 1333 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 GSG1L2A8MUP6 293 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 GJB2P29033 226 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 MB21D2Q8IYB1 491 aaPredicted RBP16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 IFNL3Q8IZI9 196 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 CHAMP1Q96JM3 812 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
SNRNP27-201ENST00000244227 CACNA1SQ13698 1873 aa16.31■□□□□ 0.2
SNRNP27-201ENST00000244227 PRKAB2O43741 272 aa16.31■□□□□ 0.2
SNRNP27-201ENST00000244227 BBOX1O75936 387 aa16.31■□□□□ 0.2
SNRNP27-201ENST00000244227 APPP05067 770 aa16.31■□□□□ 0.2
SNRNP27-201ENST00000244227 SYT1P21579 422 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms