RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 SNW1Q13573 536 aaKnown RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 TTLL11Q8NHH1 800 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 C16orf45Q96MC5 204 aaPredicted RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 ADAMTSL3P82987 1691 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 IRS4O14654 1257 aaPredicted RBP10.71□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF75DP51815 510 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 CCDC73Q6ZRK6 1079 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 RALYLQ86SE5 291 aaKnown RBP10.71□□□□□ -0.7
SYDE2-201ENST00000234668 NLRP10Q86W26 655 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 UBE2Q2Q8WVN8 375 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 C8orf76Q96K31 380 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 GPR108Q9NPR9 543 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 RCOR1Q9UKL0 485 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 WWC3Q9ULE0 1092 aa10.71□□□□□ -0.7
SYDE2-201ENST00000234668 COL18A1P39060 1754 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 WTIPA6NIX2 430 aaPredicted RBP10.7□□□□□ -0.7
SYDE2-201ENST00000234668 B4E1Z4 1266 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 KIF28PB7ZC32 967 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 NDUFA8P51970 172 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 PTPN21Q16825 1174 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 SMIM5Q71RC9 77 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 ZBTB38Q8NAP3 1195 aaPredicted RBP10.7□□□□□ -0.7
SYDE2-201ENST00000234668 ACSBG1Q96GR2 724 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 CLIP2Q9UDT6 1046 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 HPS5Q9UPZ3 1129 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 CARMIL3Q8ND23 1372 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 MRC1P22897 1456 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 GOLGA6L19H0YKK7 550 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 KINO60870 393 aaKnown RBP10.7□□□□□ -0.7
SYDE2-201ENST00000234668 CIAO1O76071 339 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 STARD3NLO95772 234 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 STK38Q15208 465 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 CYB5R4Q7L1T6 521 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 MICU3Q86XE3 530 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 CMTR1Q8N1G2 835 aaKnown RBP10.7□□□□□ -0.7
SYDE2-201ENST00000234668 CACTINQ8WUQ7 758 aaKnown RBP10.7□□□□□ -0.7
SYDE2-201ENST00000234668 ZKSCAN3Q9BRR0 538 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 AKAP2Q9Y2D5 859 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 RIPOR2Q9Y4F9 1068 aa10.7□□□□□ -0.7
SYDE2-201ENST00000234668 GOLGB1Q14789 3259 aaKnown RBP10.7□□□□□ -0.7
SYDE2-201ENST00000234668 ARFGEF2Q9Y6D5 1785 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF142P52746 1687 aaPredicted RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 BECN2A8MW95 431 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 PCCAP05165 728 aaPredicted RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 HMGN5P82970 282 aaKnown RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 TBC1D10CQ8IV04 446 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF592Q92610 1267 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 APPBP2Q92624 585 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 LLPHQ9BRT6 129 aaKnown RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 PDCL3Q9H2J4 239 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 SEC31BQ9NQW1 1179 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 TOMM22Q9NS69 142 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 CPDO75976 1380 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 NAA16Q6N069 864 aaPredicted RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
SYDE2-201ENST00000234668 STRCP1A6NGW2 1772 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF532Q9HCE3 1301 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 ADAMTS7Q9UKP4 1686 aa10.69□□□□□ -0.7
SYDE2-201ENST00000234668 SMIM22K7EJ46 135 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 NAA30Q147X3 362 aaPredicted RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 AOPEPQ8N6M6 819 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF274Q96GC6 653 aaPredicted RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 AGXT2Q9BYV1 514 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 ANKRD18BA2A2Z9 1011 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 RIOK3O14730 519 aaKnown RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 PRKAB2O43741 272 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 CSF1RP07333 972 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 KCNQ4P56696 695 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 IQCB1Q15051 598 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 CCDC102BQ68D86 513 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 MB21D2Q8IYB1 491 aaPredicted RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 NCOA7Q8NI08 942 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF396Q96N95 335 aaPredicted RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 TRMT1Q9NXH9 659 aaKnown RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 MAP3K15Q6ZN16 1313 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 ZSCAN25Q6NSZ9 544 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 MYRIPQ8NFW9 859 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 CTNNA3Q9UI47 895 aa10.68□□□□□ -0.7
SYDE2-201ENST00000234668 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
SYDE2-201ENST00000234668 SALL1Q9NSC2 1324 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 ATP2B1P20020 1258 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 CDC27P30260 824 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 CTSWP56202 376 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 NFXL1Q6ZNB6 911 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 RBM43Q6ZSC3 357 aaKnown RBP10.67□□□□□ -0.7
SYDE2-201ENST00000234668 PLA2G4DQ86XP0 818 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 ENGASEQ8NFI3 743 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 TDRD7Q8NHU6 1098 aaKnown RBP10.67□□□□□ -0.7
SYDE2-201ENST00000234668 USP27XA6NNY8 438 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 DYNC1I1O14576 645 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 HSP90AA4PQ58FG1 418 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
SYDE2-201ENST00000234668 MIGA1Q8NAN2 632 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms