RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 MAGI1Q96QZ7 1491 aaPredicted RBP14.9□□□□□ -0.02
MSH2-201ENST00000233146 KINO60870 393 aaKnown RBP14.9□□□□□ -0.02
MSH2-201ENST00000233146 RASSF9O75901 435 aa14.9□□□□□ -0.02
MSH2-201ENST00000233146 KIF4BQ2VIQ3 1234 aa14.9□□□□□ -0.02
MSH2-201ENST00000233146 JAKMIP1Q96N16 626 aaKnown RBP14.9□□□□□ -0.02
MSH2-201ENST00000233146 DIAPH1O60610 1272 aaKnown RBP14.89□□□□□ -0.03
MSH2-201ENST00000233146 AP1G2O75843 785 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 SNUPNO95149 360 aaKnown RBP14.89□□□□□ -0.03
MSH2-201ENST00000233146 RPS6KA3P51812 740 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 FANCCQ00597 558 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 RESTQ13127 1097 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 NCAPHQ15003 741 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 KIF9Q9HAQ2 790 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 CFAP45Q9UL16 551 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 EIF3HO15372 352 aaKnown RBP eCLIP14.89□□□□□ -0.032e-8■■■■■ 41.3
MSH2-201ENST00000233146 COQ9O75208 318 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 GCKP35557 465 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 RBBP5Q15291 538 aaKnown RBP14.89□□□□□ -0.03
MSH2-201ENST00000233146 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 ZNF513Q8N8E2 541 aaPredicted RBP14.89□□□□□ -0.03
MSH2-201ENST00000233146 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 GRIN2DO15399 1336 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 MEFVO15553 781 aaPredicted RBP14.89□□□□□ -0.03
MSH2-201ENST00000233146 CEP85LQ5SZL2 805 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 B4GALNT4Q76KP1 1039 aa14.89□□□□□ -0.03
MSH2-201ENST00000233146 ASXL2Q76L83 1435 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 RHOXF2BP0C7M4 288 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 SLC8A3P57103 927 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 FAM160A1Q05DH4 1040 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 PPFIA1Q13136 1202 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 DPCR1Q3MIW9 517 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 CDCA2Q69YH5 1023 aaPredicted RBP14.88□□□□□ -0.03
MSH2-201ENST00000233146 WDR93Q6P2C0 686 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 CCDC73Q6ZRK6 1079 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 FAM76AQ8TAV0 307 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 FBXW7Q969H0 707 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 PAIP2Q9BPZ3 127 aaKnown RBP14.88□□□□□ -0.03
MSH2-201ENST00000233146 RHOXF2Q9BQY4 288 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 EHD4Q9H223 541 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 PLEKHD1A6NEE1 506 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 ACTN3Q08043 901 aaPredicted RBP14.88□□□□□ -0.03
MSH2-201ENST00000233146 TUBB2AQ13885 445 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 SLC5A9Q2M3M2 681 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 RCSD1Q6JBY9 416 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 MAGEC3Q8TD91 643 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 TUBB2BQ9BVA1 445 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 RCOR1Q9UKL0 485 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 CDC42BPGQ6DT37 1551 aa14.88□□□□□ -0.03
MSH2-201ENST00000233146 ABCA9Q8IUA7 1624 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 GOLGA8FQ08AF8 430 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 GOLGA8DPQ0D2H9 430 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 SPATS2Q86XZ4 545 aaKnown RBP14.87□□□□□ -0.03
MSH2-201ENST00000233146 MAB21L3Q8N8X9 362 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 FRMD3A2A2Y4 597 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 SKAP2O75563 359 aaPredicted RBP14.87□□□□□ -0.03
MSH2-201ENST00000233146 KIAA0754O94854 1291 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 PECAM1P16284 738 aaPredicted RBP14.87□□□□□ -0.03
MSH2-201ENST00000233146 PRKAR2BP31323 418 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 ARHGAP25P42331 645 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 TOGARAM2Q6ZUX3 1019 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 PARD3BQ8TEW8 1205 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 PNPLA6Q8IY17 1366 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 VWDEQ8N2E2 1590 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 CAPS2Q9BXY5 557 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 ATP6V0A4Q9HBG4 840 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 SAMM50Q9Y512 469 aa14.87□□□□□ -0.03
MSH2-201ENST00000233146 YTHDF3Q7Z739 585 aaKnown RBP14.86□□□□□ -0.03
MSH2-201ENST00000233146 VSTM4Q8IW00 320 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 ADGRB1O14514 1584 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 ZNF202O95125 648 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 MAP4K4O95819 1239 aaPredicted RBP14.86□□□□□ -0.03
MSH2-201ENST00000233146 PLCB4Q15147 1175 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 RIN2Q8WYP3 895 aaPredicted RBP14.86□□□□□ -0.03
MSH2-201ENST00000233146 QRICH2Q9H0J4 1663 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 STX10O60499 249 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
MSH2-201ENST00000233146 TBC1D25Q3MII6 688 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 HSD3B7Q9H2F3 369 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 VCPKMTQ9H867 229 aa14.86□□□□□ -0.03
MSH2-201ENST00000233146 ADGRF5Q8IZF2 1346 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 NAA25Q14CX7 972 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 CCDC40Q4G0X9 1142 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 KLHL23Q8NBE8 558 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 EZRP15311 586 aaKnown RBP14.85□□□□□ -0.03
MSH2-201ENST00000233146 KIRREL3Q8IZU9 778 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 DPF2Q92785 391 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 ABCC3O15438 1527 aa14.85□□□□□ -0.03
MSH2-201ENST00000233146 CBFA2T2O43439 604 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 PHACTR3Q96KR7 559 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 IRX2Q9BZI1 471 aaPredicted RBP14.84□□□□□ -0.03
MSH2-201ENST00000233146 KIAA1468Q9P260 1216 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 UGGT1Q9NYU2 1555 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 IKBKBO14920 756 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 ATP1A3P13637 1013 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 LMOD1P29536 600 aaPredicted RBP14.84□□□□□ -0.03
MSH2-201ENST00000233146 GGCXP38435 758 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 UBASH3AP57075 661 aa14.84□□□□□ -0.03
MSH2-201ENST00000233146 KARSQ15046 597 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms