RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TRIM29Q14134 588 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 NOLC1Q14978 699 aaKnown RBP eCLIP9.65□□□□□ -0.86
SPARC-201ENST00000231061 RPAP2Q8IXW5 612 aaPredicted RBP9.65□□□□□ -0.86
SPARC-201ENST00000231061 TRIM6Q9C030 488 aaPredicted RBP9.65□□□□□ -0.86
SPARC-201ENST00000231061 OGFRQ9NZT2 677 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 TSPYL4Q9UJ04 414 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 SLC45A1Q9Y2W3 748 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 F6X3S4 739 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 TBX4P57082 545 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 WASHC5Q12768 1159 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 USP4Q13107 963 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
SPARC-201ENST00000231061 TSPOAP1O95153 1857 aa9.65□□□□□ -0.87
SPARC-201ENST00000231061 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.87
SPARC-201ENST00000231061 ZNF24P17028 368 aa9.65□□□□□ -0.87
SPARC-201ENST00000231061 ZNF132P52740 706 aa9.65□□□□□ -0.87
SPARC-201ENST00000231061 RNF214Q8ND24 703 aa9.65□□□□□ -0.87
SPARC-201ENST00000231061 FOXO3O43524 673 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 SDSP20132 328 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 SNX1Q13596 522 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 DBN1Q16643 649 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.64□□□□□ -0.87
SPARC-201ENST00000231061 MCTP1Q6DN14 999 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 POLR3CQ9BUI4 534 aaPredicted RBP9.64□□□□□ -0.87
SPARC-201ENST00000231061 CHL1O00533 1208 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 EIF3JO75822 258 aaKnown RBP9.64□□□□□ -0.87
SPARC-201ENST00000231061 TTC39BQ5VTQ0 682 aaPredicted RBP9.64□□□□□ -0.87
SPARC-201ENST00000231061 LINC00854A0A1B0GVQ3 168 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 PLEKHG3A1L390 1219 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 FGFR1OPO95684 399 aaKnown RBP9.64□□□□□ -0.87
SPARC-201ENST00000231061 TERF2Q15554 542 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 TTLL5Q6EMB2 1281 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 GABPB2Q8TAK5 448 aaPredicted RBP9.64□□□□□ -0.87
SPARC-201ENST00000231061 ZNF512BQ96KM6 892 aaPredicted RBP9.64□□□□□ -0.87
SPARC-201ENST00000231061 TBC1D2BQ9UPU7 963 aa9.64□□□□□ -0.87
SPARC-201ENST00000231061 ST18O60284 1047 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 GJA8P48165 433 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 RWDD2BP57060 319 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 GAS2L3Q86XJ1 694 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 RIMBP3CA6NJZ7 1639 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 RIMBP3BA6NNM3 1639 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 RIMBP3Q9UFD9 1639 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 VDRP11473 427 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 AMPHP49418 695 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
SPARC-201ENST00000231061 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
SPARC-201ENST00000231061 SEPT2Q15019 361 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 HSP90B2PQ58FF3 399 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 AGAP3Q96P47 875 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 ZHX3Q9H4I2 956 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 PTPRCP08575 1304 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 RTL1A6NKG5 1358 aa9.63□□□□□ -0.87
SPARC-201ENST00000231061 SLC26A4O43511 780 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
SPARC-201ENST00000231061 RBM6P78332 1123 aaKnown RBP9.62□□□□□ -0.87
SPARC-201ENST00000231061 G2E3Q7L622 706 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 HOOK3Q86VS8 718 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 TMCO5AQ8N6Q1 288 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 SNRNP27Q8WVK2 155 aaKnown RBP9.62□□□□□ -0.87
SPARC-201ENST00000231061 SLC39A3Q9BRY0 314 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 STK31Q9BXU1 1019 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 INCENPQ9NQS7 918 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 ROBO2Q9HCK4 1378 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 ENPP1P22413 925 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 IGBP1P78318 339 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 TTC31Q49AM3 519 aaPredicted RBP9.62□□□□□ -0.87
SPARC-201ENST00000231061 TSHZ3Q63HK5 1081 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 SPATA7Q9P0W8 599 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 EXOC6BQ9Y2D4 811 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 REC8O95072 547 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 CYP11B2P19099 503 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 RPS6KA3P51812 740 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 KCTD2Q14681 263 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
SPARC-201ENST00000231061 SFMBT2Q5VUG0 894 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 C14orf80Q86SX3 495 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 PHACTR1Q9C0D0 580 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 MRGBPQ9NV56 204 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
SPARC-201ENST00000231061 MYO1CO00159 1063 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 ALDH1B1P30837 517 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 PPP4R3CPQ6ZMV5 832 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 SPACA7Q96KW9 195 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 SEL1LQ9UBV2 794 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 TNRQ92752 1358 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 ATP10DQ9P241 1426 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 A0A1B0GUL7 405 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 KIF11P52732 1056 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 ZNF131P52739 623 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 NUCB2P80303 420 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 NAALADL2Q58DX5 795 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 SH3GL3Q99963 347 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms