RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ZNF76P36508 570 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 STX17P56962 302 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 RPAP2Q8IXW5 612 aaPredicted RBP12.44□□□□□ -0.42
USP31-201ENST00000219689 CCDC42Q96M95 316 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 PPFIA2O75334 1257 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
USP31-201ENST00000219689 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 BICDL2A1A5D9 508 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
USP31-201ENST00000219689 MYL6BP14649 208 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 CTNND2Q9UQB3 1225 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 MMS22LQ6ZRQ5 1243 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 PTPN23Q9H3S7 1636 aa12.44□□□□□ -0.42
USP31-201ENST00000219689 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
USP31-201ENST00000219689 LRMPQ12912 555 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 PSMD2Q13200 908 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 CREB3O43889 395 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 GOLGA8KD6RF30 607 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 STAT6P42226 847 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 CCDC26Q8TAB7 109 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 MRRFQ96E11 262 aaKnown RBP12.43□□□□□ -0.42
USP31-201ENST00000219689 MED4Q9NPJ6 270 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 RMND1Q9NWS8 449 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 ARHGAP24Q8N264 748 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 FCHSD2O94868 740 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 NLRP5P59047 1200 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 CETN1Q12798 172 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 DENND2CQ68D51 928 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 PSMB7Q99436 277 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 PALMDQ9NP74 551 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 PLCB1Q9NQ66 1216 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 IMPACTQ9P2X3 320 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 PPP1R9AQ9ULJ8 1098 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 TIAM1Q13009 1591 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 TAOK1Q7L7X3 1001 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 MTUS1Q9ULD2 1270 aa12.43□□□□□ -0.42
USP31-201ENST00000219689 STMN1P16949 149 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
USP31-201ENST00000219689 ZC4H2Q9NQZ6 224 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 A0A087WZG4 1122 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
USP31-201ENST00000219689 A0A087WUV0 522 aaPredicted RBP12.42□□□□□ -0.42
USP31-201ENST00000219689 HSPA1LP34931 641 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 RUFY4Q6ZNE9 571 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 MPHOSPH8Q99549 860 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 PYCARDQ9ULZ3 195 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 MYO1CO00159 1063 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 CEP104O60308 925 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 INF2Q27J81 1249 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 NCOA1Q15788 1441 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 GJC1P36383 396 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 NUTM2GQ5VZR2 741 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 PRPF38AQ8NAV1 312 aaKnown RBP12.42□□□□□ -0.42
USP31-201ENST00000219689 SLC26A6Q9BXS9 759 aa12.42□□□□□ -0.42
USP31-201ENST00000219689 ARL1P40616 181 aaPredicted RBP12.41□□□□□ -0.42
USP31-201ENST00000219689 TERF2Q15554 542 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 USP6NLQ92738 828 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 SH3GL3Q99963 347 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 CYP26C1Q6V0L0 522 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 TMEM63CQ9P1W3 806 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 LARSQ9P2J5 1176 aaKnown RBP12.41□□□□□ -0.42
USP31-201ENST00000219689 FAN1Q9Y2M0 1017 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 YY1AP1Q9H869 796 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 MTX1Q13505 466 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 HDAC1Q13547 482 aaPredicted RBP12.41□□□□□ -0.42
USP31-201ENST00000219689 TRIM31Q9BZY9 425 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 YIPF3Q9GZM5 350 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 ANKRD36BQ8N2N9 1353 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 FANCCQ00597 558 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 ALDH1L2Q3SY69 923 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.41□□□□□ -0.42
USP31-201ENST00000219689 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 FERMT2Q96AC1 680 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 TAF11Q15544 211 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 VCX3AQ9NNX9 186 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 JAKMIP2Q96AA8 810 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 CALML4Q96GE6 196 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 CXorf56Q9H5V9 222 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 CITO14578 2027 aa12.41□□□□□ -0.42
USP31-201ENST00000219689 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 NSD3Q9BZ95 1437 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 EFCAB8A8MWE9 144 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 CALR3Q96L12 384 aaKnown RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 ATP2A1O14983 1001 aa12.4□□□□□ -0.42
USP31-201ENST00000219689 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
USP31-201ENST00000219689 LMBR1Q8WVP7 490 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms