RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 MFSD14BQ5SR56 506 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 TEX11Q8IYF3 940 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 ESR2Q92731 530 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 TBC1D32Q96NH3 1257 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 NRKQ7Z2Y5 1582 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 ATP5JP18859 108 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 PTPN12Q05209 780 aaKnown RBP10.96□□□□□ -0.65
CCDC113-201ENST00000219299 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 SUPT20HQ8NEM7 779 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 VAT1LQ9HCJ6 419 aa10.96□□□□□ -0.65
CCDC113-201ENST00000219299 PSDA5PKW4 1024 aaPredicted RBP10.96□□□□□ -0.66
CCDC113-201ENST00000219299 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 ZNF804BA4D1E1 1349 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 BBOX1O75936 387 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 ADORA1P30542 326 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 PHKA1P46020 1223 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 ARHGAP27Q6ZUM4 889 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 SIRT2Q8IXJ6 389 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 APPBP2Q92624 585 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 CEP89Q96ST8 783 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 SDF4Q9BRK5 362 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 ARMT1Q9H993 441 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 FBXO3Q9UK99 471 aa10.96□□□□□ -0.66
CCDC113-201ENST00000219299 CCDC171Q6TFL3 1326 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 WDR33Q9C0J8 1336 aaKnown RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 PES1O00541 588 aaKnown RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 EIF6P56537 245 aaKnown RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 GUCY1B3Q02153 619 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 NFIXQ14938 502 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 C8orf34Q49A92 452 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 LINC00116Q8NCU8 138 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 AATFQ9NY61 560 aaKnown RBP eCLIP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 USP32Q8NFA0 1604 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 CEMIPQ8WUJ3 1361 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 SNAP23O00161 211 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 SEC24BO95487 1268 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 GNAT2P19087 354 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 DBNLQ9UJU6 430 aaKnown RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 GPAA1O43292 621 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 CALRP27797 417 aaKnown RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 FNBP4Q8N3X1 1017 aaPredicted RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 IQSEC2Q5JU85 1478 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 WDR78Q5VTH9 848 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 KAT14Q9H8E8 782 aa10.95□□□□□ -0.66
CCDC113-201ENST00000219299 SH2B1Q9NRF2 756 aaPredicted RBP10.95□□□□□ -0.66
CCDC113-201ENST00000219299 UQCRHLA0A096LP55 91 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 UQCRHP07919 91 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 UBE4AQ14139 1066 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 IBTKQ9P2D0 1353 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 PRPF40AO75400 957 aaKnown RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 WTAPQ15007 396 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 TAF3Q5VWG9 929 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 KIAA0825Q8IV33 1275 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 ANKRD20A12PQ8NF67 263 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 FBXO41Q8TF61 875 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 UBE2Q2Q8WVN8 375 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 TLR7Q9NYK1 1049 aaKnown RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 KLF18A0A0U1RQI7 1052 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 ISCA1Q9BUE6 129 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 KRT23Q9C075 422 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 SAP30BPQ9UHR5 308 aaKnown RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 MAP2P11137 1827 aaKnown RBP10.94□□□□□ -0.66
CCDC113-201ENST00000219299 ZNF532Q9HCE3 1301 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 SSFA2P28290 1259 aa10.94□□□□□ -0.66
CCDC113-201ENST00000219299 MCM4P33991 863 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 TBC1D22AQ8WUA7 517 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 WASF1Q92558 559 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 ERCC4Q92889 916 aaPredicted RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 ZNF396Q96N95 335 aaPredicted RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 XDHP47989 1333 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 NAT10Q9H0A0 1025 aaKnown RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 HELLSQ9NRZ9 838 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 ADCY9O60503 1353 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 PRDM1O75626 825 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 ME1P48163 572 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 RUFY1Q96T51 708 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 CNNM2Q9H8M5 875 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 CDR1P51861 262 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 R3HDM1Q15032 1099 aaKnown RBP10.93□□□□□ -0.66
CCDC113-201ENST00000219299 C8orf76Q96K31 380 aa10.93□□□□□ -0.66
CCDC113-201ENST00000219299 CIAO1O76071 339 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 METAP2P50579 478 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC113-201ENST00000219299 KRT85P78386 507 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 TCP10Q12799 353 aa10.92□□□□□ -0.66
CCDC113-201ENST00000219299 GRM1Q13255 1194 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms