RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 TERF1P54274 439 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 TSGA10IPQ3SY00 556 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 PUS7LQ9H0K6 701 aaKnown RBP13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 TTC12Q9H892 705 aaPredicted RBP13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 PIH1D3Q9NQM4 214 aaKnown RBP13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 USP25Q9UHP3 1055 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
GPATCH1-201ENST00000170564 MROH5Q6ZUA9 1318 aa13.4□□□□□ -0.27
GPATCH1-201ENST00000170564 UTRNP46939 3433 aa13.4□□□□□ -0.27
GPATCH1-201ENST00000170564 RNF113AO15541 343 aaKnown RBP13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 MCM2P49736 904 aa13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 PUM3Q15397 648 aaKnown RBP13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
GPATCH1-201ENST00000170564 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 IGSF3O75054 1194 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 PHF14O94880 888 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 HSPD1P10809 573 aaKnown RBP13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 GORABQ5T7V8 394 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 PROM2Q8N271 834 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 HELLSQ9NRZ9 838 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 TPCN1Q9ULQ1 816 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 MBD3O95983 291 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 CHRNDQ07001 517 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 TOB2Q14106 344 aaPredicted RBP13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 LPIN2Q92539 896 aa13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 CELF1Q92879 486 aaKnown RBP13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 SYAP1Q96A49 352 aaPredicted RBP13.38□□□□□ -0.27
GPATCH1-201ENST00000170564 RASGRF1Q13972 1273 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 RTCBQ9Y3I0 505 aaKnown RBP13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 COL1A1P02452 1464 aaPredicted RBP13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 ME3Q16798 604 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 TTLL5Q6EMB2 1281 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 INTS4Q96HW7 963 aaKnown RBP13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 PDRG1Q9NUG6 133 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 KCNJ4P48050 445 aa13.37□□□□□ -0.27
GPATCH1-201ENST00000170564 TM4SF1P30408 202 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 BCAMP50895 628 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 LIMCH1Q9UPQ0 1083 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 TCRBV5S4A2TA0A5A2 114 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 RGL2O15211 777 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 TRIM37O94972 964 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 ZKSCAN1P17029 563 aaPredicted RBP13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 SMAP1Q8IYB5 467 aaPredicted RBP13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 GADD45BO75293 160 aaPredicted RBP13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 RPS6KB1P23443 525 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 PPP4R3BQ5MIZ7 849 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 WWC3Q9ULE0 1092 aa13.36□□□□□ -0.27
GPATCH1-201ENST00000170564 MCM5P33992 734 aa13.35□□□□□ -0.27
GPATCH1-201ENST00000170564 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
GPATCH1-201ENST00000170564 DSCC1Q9BVC3 393 aa13.35□□□□□ -0.27
GPATCH1-201ENST00000170564 CCDC94Q9BW85 323 aaPredicted RBP13.35□□□□□ -0.27
GPATCH1-201ENST00000170564 KLRK1P26718 216 aa13.35□□□□□ -0.27
GPATCH1-201ENST00000170564 ZPR1O75312 459 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 KRT27Q7Z3Y8 459 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 TICAM2Q86XR7 235 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 NECAB1Q8N987 351 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 BRD1O95696 1058 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 ADD2P35612 726 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 MINPP1Q9UNW1 487 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 NFIXQ14938 502 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 NOLC1Q14978 699 aaKnown RBP eCLIP13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
GPATCH1-201ENST00000170564 TCHHQ07283 1943 aa13.33□□□□□ -0.27
GPATCH1-201ENST00000170564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.27
GPATCH1-201ENST00000170564 ADCY5O95622 1261 aa13.33□□□□□ -0.27
GPATCH1-201ENST00000170564 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.27
GPATCH1-201ENST00000170564 NBPF5PQ86XG9 351 aaPredicted RBP13.33□□□□□ -0.27
GPATCH1-201ENST00000170564 SPATA5Q8NB90 893 aa13.33□□□□□ -0.27
GPATCH1-201ENST00000170564 SLC9C2Q5TAH2 1124 aa13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 CCDC83Q8IWF9 413 aa13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 BSDC1Q9NW68 430 aaPredicted RBP13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 APPBP2Q92624 585 aa13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 LRRC2Q9BYS8 371 aa13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 ALDH8A1Q9H2A2 487 aaPredicted RBP13.33□□□□□ -0.28
GPATCH1-201ENST00000170564 TRAPPC3LQ5T215 181 aa13.32□□□□□ -0.28
GPATCH1-201ENST00000170564 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
GPATCH1-201ENST00000170564 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
GPATCH1-201ENST00000170564 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
GPATCH1-201ENST00000170564 ZNF804BA4D1E1 1349 aa13.32□□□□□ -0.28
GPATCH1-201ENST00000170564 GPAA1O43292 621 aa13.32□□□□□ -0.28
GPATCH1-201ENST00000170564 FGAP02671 866 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms