RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 FPGT-TNNI3KV9GXZ4 949 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 V9GYY5 206 aaPredicted RBP21.47■■□□□ 1.03
MBD3-201ENST00000156825 RRP9O43818 475 aaKnown RBP21.47■■□□□ 1.03
MBD3-201ENST00000156825 EZRP15311 586 aaKnown RBP21.47■■□□□ 1.03
MBD3-201ENST00000156825 OTUD7BQ6GQQ9 843 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 KIAA0556O60303 1618 aa21.47■■□□□ 1.03
MBD3-201ENST00000156825 PZPP20742 1482 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 ZNF496Q96IT1 587 aaPredicted RBP21.46■■□□□ 1.03
MBD3-201ENST00000156825 RAB3GAP1Q15042 981 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 DNAJC10Q8IXB1 793 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 ZFYVE9O95405 1425 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 CAVIN2O95810 425 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 PLBD2Q8NHP8 589 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 AKNAD1Q5T1N1 836 aa21.46■■□□□ 1.03
MBD3-201ENST00000156825 RGS22Q8NE09 1264 aa21.45■■□□□ 1.03
MBD3-201ENST00000156825 C6orf50Q9HD87 102 aa21.45■■□□□ 1.03
MBD3-201ENST00000156825 PSMA7O14818 248 aa21.45■■□□□ 1.02
MBD3-201ENST00000156825 BMP15O95972 392 aa21.45■■□□□ 1.02
MBD3-201ENST00000156825 PARP3Q9Y6F1 533 aa21.45■■□□□ 1.02
MBD3-201ENST00000156825 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.02
MBD3-201ENST00000156825 GNAT2P19087 354 aa21.45■■□□□ 1.02
MBD3-201ENST00000156825 SH3TC1Q8TE82 1336 aa21.45■■□□□ 1.02
MBD3-201ENST00000156825 XAGE2Q96GT9 111 aa21.45■■□□□ 1.02
MBD3-201ENST00000156825 CLEC11AQ9Y240 323 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 TRAPPC3LQ5T215 181 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 EDC3Q96F86 508 aaKnown RBP21.44■■□□□ 1.02
MBD3-201ENST00000156825 WDR62O43379 1518 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 MAP2K1Q02750 393 aaPredicted RBP21.44■■□□□ 1.02
MBD3-201ENST00000156825 RRP36Q96EU6 259 aaKnown RBP21.44■■□□□ 1.02
MBD3-201ENST00000156825 TCHPQ9BT92 498 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 SPDYE3A6NKU9 549 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 ZNF174Q15697 407 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 HOOK3Q86VS8 718 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 PKD2L1Q9P0L9 805 aa21.44■■□□□ 1.02
MBD3-201ENST00000156825 KCNQ3O43525 872 aa21.43■■□□□ 1.02
MBD3-201ENST00000156825 KRT2P35908 639 aa21.43■■□□□ 1.02
MBD3-201ENST00000156825 CCNL1Q9UK58 526 aaPredicted RBP21.43■■□□□ 1.02
MBD3-201ENST00000156825 TRPM2O94759 1503 aa21.43■■□□□ 1.02
MBD3-201ENST00000156825 UBE4AQ14139 1066 aa21.43■■□□□ 1.02
MBD3-201ENST00000156825 NOLC1Q14978 699 aaKnown RBP eCLIP21.43■■□□□ 1.02
MBD3-201ENST00000156825 MYL10Q9BUA6 226 aa21.43■■□□□ 1.02
MBD3-201ENST00000156825 FAM98CQ17RN3 349 aaKnown RBP21.43■■□□□ 1.02
MBD3-201ENST00000156825 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
MBD3-201ENST00000156825 UFL1O94874 794 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 PPP4R3BQ5MIZ7 849 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 FERMT2Q96AC1 680 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 VWA3AA6NCI4 1184 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 LRRC27Q9C0I9 530 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 KRT79Q5XKE5 535 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 UIMC1Q96RL1 719 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 COL17A1Q9UMD9 1497 aaPredicted RBP21.42■■□□□ 1.02
MBD3-201ENST00000156825 SBNO1A3KN83 1393 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 SLC27A2O14975 620 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 TEX11Q8IYF3 940 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 FAM107BQ9H098 131 aa21.42■■□□□ 1.02
MBD3-201ENST00000156825 MAATS1Q7Z4T9 603 aa21.41■■□□□ 1.02
MBD3-201ENST00000156825 SLC52A2Q9HAB3 445 aa21.41■■□□□ 1.02
MBD3-201ENST00000156825 GPCPD1Q9NPB8 672 aa21.41■■□□□ 1.02
MBD3-201ENST00000156825 CALML3P27482 149 aa21.41■■□□□ 1.02
MBD3-201ENST00000156825 LETM2Q2VYF4 491 aa21.41■■□□□ 1.02
MBD3-201ENST00000156825 CCDC97Q96F63 343 aaPredicted RBP21.41■■□□□ 1.02
MBD3-201ENST00000156825 CGNQ9P2M7 1197 aaKnown RBP21.41■■□□□ 1.02
MBD3-201ENST00000156825 CFAP65Q6ZU64 1925 aaKnown RBP21.41■■□□□ 1.02
MBD3-201ENST00000156825 IFNKQ9P0W0 207 aa21.41■■□□□ 1.02
MBD3-201ENST00000156825 PHACTR2O75167 634 aa21.4■■□□□ 1.02
MBD3-201ENST00000156825 SHTN1A0MZ66 631 aa21.4■■□□□ 1.02
MBD3-201ENST00000156825 GPAA1O43292 621 aa21.4■■□□□ 1.02
MBD3-201ENST00000156825 ZFP91Q96JP5 570 aaPredicted RBP21.4■■□□□ 1.02
MBD3-201ENST00000156825 JDP2Q8WYK2 163 aa21.4■■□□□ 1.02
MBD3-201ENST00000156825 NAA15Q9BXJ9 866 aaKnown RBP21.4■■□□□ 1.02
MBD3-201ENST00000156825 ANKRD2Q9GZV1 360 aa21.4■■□□□ 1.02
MBD3-201ENST00000156825 GTF2F1P35269 517 aaKnown RBP eCLIP21.39■■□□□ 1.028e-8■■■□□ 18.7
MBD3-201ENST00000156825 RTL9Q8NET4 1388 aa21.39■■□□□ 1.02
MBD3-201ENST00000156825 KARSQ15046 597 aaKnown RBP21.39■■□□□ 1.02
MBD3-201ENST00000156825 FAM212AQ96EL1 285 aa21.39■■□□□ 1.02
MBD3-201ENST00000156825 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.02
MBD3-201ENST00000156825 MRVI1Q9Y6F6 885 aa21.39■■□□□ 1.02
MBD3-201ENST00000156825 RPS6KB1P23443 525 aa21.39■■□□□ 1.01
MBD3-201ENST00000156825 GOLGA6L10A0A0M3HER8 536 aa21.39■■□□□ 1.01
MBD3-201ENST00000156825 GOLGA6L9A6NEM1 432 aa21.39■■□□□ 1.01
MBD3-201ENST00000156825 HIBADHP31937 336 aaKnown RBP21.39■■□□□ 1.01
MBD3-201ENST00000156825 GJC1P36383 396 aa21.39■■□□□ 1.01
MBD3-201ENST00000156825 TTC16Q8NEE8 873 aa21.39■■□□□ 1.01
MBD3-201ENST00000156825 DTHD1Q6ZMT9 781 aa21.39■■□□□ 1.01
MBD3-201ENST00000156825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.39■■□□□ 1.014e-6■■□□□ 12.6
MBD3-201ENST00000156825 hCG_1642624A0A1W2PR95 340 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 PLCG2P16885 1265 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 CTR9Q6PD62 1173 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 DPH6Q7L8W6 267 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 GCKRQ14397 625 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 AATFQ9NY61 560 aaKnown RBP eCLIP21.38■■□□□ 1.018e-6■■■■□ 21.3
MBD3-201ENST00000156825 MAPK8IP1Q9UQF2 711 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 ZYXQ15942 572 aaKnown RBP21.38■■□□□ 1.01
MBD3-201ENST00000156825 CTAGE1Q96RT6 745 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 LZTFL1Q9NQ48 299 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 HELLSQ9NRZ9 838 aa21.38■■□□□ 1.01
MBD3-201ENST00000156825 V9GY48 417 aaPredicted RBP21.38■■□□□ 1.01
MBD3-201ENST00000156825 EDC4Q6P2E9 1401 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms