RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 AMPD3Q01432 767 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 DHX32Q7L7V1 743 aaKnown RBP13.1□□□□□ -0.31
PKP2-201ENST00000070846 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 MMP10P09238 476 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 SCNN1DP51172 638 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 RBM6P78332 1123 aaKnown RBP13.1□□□□□ -0.31
PKP2-201ENST00000070846 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
PKP2-201ENST00000070846 PCCAP05165 728 aaPredicted RBP13.09□□□□□ -0.31
PKP2-201ENST00000070846 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 TEKT1Q969V4 418 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
PKP2-201ENST00000070846 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 KBTBD3Q8NAB2 608 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 TGFBRAP1Q8WUH2 860 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
PKP2-201ENST00000070846 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
PKP2-201ENST00000070846 CACNA2D4Q7Z3S7 1137 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 USP40Q9NVE5 1235 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 ANO10Q9NW15 660 aa13.09□□□□□ -0.31
PKP2-201ENST00000070846 RBM27Q9P2N5 1060 aaKnown RBP13.09□□□□□ -0.31
PKP2-201ENST00000070846 BACH1O14867 736 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 CPA1P15085 419 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 DESP17661 470 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 CALML3P27482 149 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 ANAPC15P60006 121 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 BICD1Q96G01 975 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 GREM2Q9H772 168 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 BCAMP50895 628 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 FAM227BQ96M60 508 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 FAM135BQ49AJ0 1406 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 CYP27B1O15528 508 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
PKP2-201ENST00000070846 ATP2B4P23634 1241 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 HSPA1LP34931 641 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 SLC1A4P43007 532 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 FKBP15Q5T1M5 1219 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 HOOK2Q96ED9 719 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 ZBTB21Q9ULJ3 1066 aa13.08□□□□□ -0.32
PKP2-201ENST00000070846 ZNF532Q9HCE3 1301 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 USP8P40818 1118 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 FAM43AQ8N2R8 423 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 SMCR8Q8TEV9 937 aaPredicted RBP13.07□□□□□ -0.32
PKP2-201ENST00000070846 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 MARCKSP29966 332 aaPredicted RBP13.07□□□□□ -0.32
PKP2-201ENST00000070846 GNA11P29992 359 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 CETN1Q12798 172 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 TNFAIP1Q13829 316 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 CCDC40Q4G0X9 1142 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 STXBP4Q6ZWJ1 553 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
PKP2-201ENST00000070846 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
PKP2-201ENST00000070846 ABCC3O15438 1527 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 NSMFQ6X4W1 530 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 CSADQ9Y600 493 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 ANKARQ7Z5J8 1434 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 CA8P35219 290 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 MTIF2P46199 727 aaKnown RBP13.06□□□□□ -0.32
PKP2-201ENST00000070846 CHRNDQ07001 517 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
PKP2-201ENST00000070846 NEBLO76041 1014 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 FGFR1OPO95684 399 aaKnown RBP13.06□□□□□ -0.32
PKP2-201ENST00000070846 ZSCAN16Q9H4T2 348 aaPredicted RBP13.06□□□□□ -0.32
PKP2-201ENST00000070846 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
PKP2-201ENST00000070846 AFMP43652 599 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 BEND3Q5T5X7 828 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 A2ML1A8K2U0 1454 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 USP17L21D6R901 530 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
PKP2-201ENST00000070846 FNBP4Q8N3X1 1017 aaPredicted RBP13.05□□□□□ -0.32
PKP2-201ENST00000070846 RAD50Q92878 1312 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 AK2P54819 239 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
PKP2-201ENST00000070846 DNAI2Q9GZS0 605 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 BMP15O95972 392 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
PKP2-201ENST00000070846 CCDC150Q8NCX0 1101 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
PKP2-201ENST00000070846 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
PKP2-201ENST00000070846 SEC31BQ9NQW1 1179 aa13.05□□□□□ -0.32
PKP2-201ENST00000070846 TCP10L2B9ZVM9 353 aa13.04□□□□□ -0.32
PKP2-201ENST00000070846 SKIDA1Q1XH10 827 aa13.04□□□□□ -0.32
PKP2-201ENST00000070846 CPLX3Q8WVH0 158 aa13.04□□□□□ -0.32
PKP2-201ENST00000070846 ARHGAP31Q2M1Z3 1444 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms