RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 ATP2B3Q16720 1220 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 MICU3Q86XE3 530 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 SPATA31A3Q5VYP0 1347 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 TPM3P06753 285 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 HLFQ16534 295 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 SLC9C2Q5TAH2 1124 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
CDC27-201ENST00000066544 ZNF213O14771 459 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 NPHP1O15259 732 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 IL2RBP14784 551 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 NDUFA8P51970 172 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 TCIRG1Q13488 830 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 GNL2Q13823 731 aaKnown RBP9.67□□□□□ -0.86
CDC27-201ENST00000066544 IQCB1Q15051 598 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PTPN21Q16825 1174 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PCDH11XQ9BZA7 1347 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PCDH11YQ9BZA8 1340 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 FAM160A1Q05DH4 1040 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 SYNE3Q6ZMZ3 975 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PHKBQ93100 1093 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 GREM2Q9H772 168 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 TBC1D2BQ9UPU7 963 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 USP27XA6NNY8 438 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PLA2G4DQ86XP0 818 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 MRPS27Q92552 414 aaKnown RBP9.67□□□□□ -0.86
CDC27-201ENST00000066544 SMC2O95347 1197 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
CDC27-201ENST00000066544 UBE2Q2LH0YL09 131 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 FOXP2O15409 715 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 ATP2B1P20020 1258 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 KIF6Q6ZMV9 814 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 CEP57L1Q8IYX8 460 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 PALLDQ8WX93 1383 aa9.67□□□□□ -0.86
CDC27-201ENST00000066544 MST1RQ04912 1400 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 HSP90AA4PQ58FG1 418 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 RBM43Q6ZSC3 357 aaKnown RBP9.66□□□□□ -0.86
CDC27-201ENST00000066544 CTNNA3Q9UI47 895 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 TRDNQ13061 729 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 DPCR1Q3MIW9 517 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 RRP12Q5JTH9 1297 aaKnown RBP9.66□□□□□ -0.86
CDC27-201ENST00000066544 B4E1Z4 1266 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 SKILP12757 684 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 ITGA6P23229 1130 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 ANTXR2P58335 489 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 NFXL1Q6ZNB6 911 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 CCDC69A6NI79 296 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 KIF28PB7ZC32 967 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 MCAMP43121 646 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 NCOA7Q8NI08 942 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 ZNF274Q96GC6 653 aaPredicted RBP9.66□□□□□ -0.86
CDC27-201ENST00000066544 ANO10Q9NW15 660 aa9.66□□□□□ -0.86
CDC27-201ENST00000066544 IGSF3O75054 1194 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 PDCL2Q8N4E4 241 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 APPBP2Q92624 585 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 TRMT112Q9UI30 125 aaKnown RBP9.65□□□□□ -0.86
CDC27-201ENST00000066544 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 SPTLC2O15270 562 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 BRINP3Q76B58 766 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 GPR108Q9NPR9 543 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 IQSEC3Q9UPP2 1182 aaPredicted RBP9.65□□□□□ -0.86
CDC27-201ENST00000066544 AFDNP55196 1824 aaKnown RBP9.65□□□□□ -0.86
CDC27-201ENST00000066544 U2AF2P26368 475 aaKnown RBP eCLIP9.65□□□□□ -0.864e-9■■■■■ 27.7
CDC27-201ENST00000066544 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
CDC27-201ENST00000066544 MYSM1Q5VVJ2 828 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 ENGASEQ8NFI3 743 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 FBXO18Q8NFZ0 1043 aa9.65□□□□□ -0.86
CDC27-201ENST00000066544 ERVV-2B6SEH9 535 aa9.65□□□□□ -0.87
CDC27-201ENST00000066544 PHKA1P46020 1223 aa9.65□□□□□ -0.87
CDC27-201ENST00000066544 LINC00301Q8NCQ3 95 aa9.65□□□□□ -0.87
CDC27-201ENST00000066544 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.87
CDC27-201ENST00000066544 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 PIGBQ92521 554 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 HPS5Q9UPZ3 1129 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 CTAGE5O15320 804 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 AGXT2Q9BYV1 514 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 PIH1D3Q9NQM4 214 aaKnown RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 SCN11AQ9UI33 1791 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 LRRFIP1Q32MZ4 808 aaKnown RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 TBC1D10CQ8IV04 446 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 LRRC8AQ8IWT6 810 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 CCDC112Q8NEF3 446 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 IFNKQ9P0W0 207 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 WWC3Q9ULE0 1092 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 SIPA1L3O60292 1781 aaPredicted RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 SLC3A2P08195 630 aaKnown RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 TMC6Q7Z403 805 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 DHX40Q8IX18 779 aaKnown RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 MB21D2Q8IYB1 491 aaPredicted RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 CMTR1Q8N1G2 835 aaKnown RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 RFX7Q2KHR2 1363 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 MTERF4Q7Z6M4 381 aaKnown RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 FMR1NBQ8N0W7 255 aaPredicted RBP9.64□□□□□ -0.87
CDC27-201ENST00000066544 CLIC6Q96NY7 704 aa9.64□□□□□ -0.87
CDC27-201ENST00000066544 MRC1P22897 1456 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 298.2 ms