RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 APPBP2Q92624 585 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 ARMT1Q9H993 441 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 ECM2O94769 699 aaPredicted RBP12.68□□□□□ -0.38
RGPD5-201ENST00000016946 SEPT7Q16181 437 aaKnown RBP12.68□□□□□ -0.38
RGPD5-201ENST00000016946 GPR162Q16538 588 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 DRC1Q96MC2 740 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 BIN2Q9UBW5 565 aaPredicted RBP12.67□□□□□ -0.38
RGPD5-201ENST00000016946 UBE2HP62256 183 aa12.67□□□□□ -0.38
RGPD5-201ENST00000016946 APOBRQ0VD83 1088 aa12.67□□□□□ -0.38
RGPD5-201ENST00000016946 DLGAP5Q15398 846 aa12.67□□□□□ -0.38
RGPD5-201ENST00000016946 USO1O60763 962 aaKnown RBP12.67□□□□□ -0.38
RGPD5-201ENST00000016946 RBM28Q9NW13 759 aaKnown RBP12.67□□□□□ -0.38
RGPD5-201ENST00000016946 CAVIN2O95810 425 aa12.67□□□□□ -0.38
RGPD5-201ENST00000016946 RRAGBQ5VZM2 374 aa12.67□□□□□ -0.38
RGPD5-201ENST00000016946 MRPS27Q92552 414 aaKnown RBP12.66□□□□□ -0.38
RGPD5-201ENST00000016946 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
RGPD5-201ENST00000016946 KCNQ3O43525 872 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 ZNF165P49910 485 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 ASIC1P78348 528 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 NAP1L4Q99733 375 aaKnown RBP12.66□□□□□ -0.38
RGPD5-201ENST00000016946 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.66□□□□□ -0.38
RGPD5-201ENST00000016946 WDR17Q8IZU2 1322 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 AFMP43652 599 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 SPATA5Q8NB90 893 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 KIF2AO00139 706 aaPredicted RBP12.66□□□□□ -0.38
RGPD5-201ENST00000016946 PRDM1O75626 825 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 ARHGEF5Q12774 1597 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
RGPD5-201ENST00000016946 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 BACH1O14867 736 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 KRT13P13646 458 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 KRT2P35908 639 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 NCBP1Q09161 790 aaKnown RBP12.65□□□□□ -0.38
RGPD5-201ENST00000016946 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 ZKSCAN3Q9BRR0 538 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 H7C1D1 291 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
RGPD5-201ENST00000016946 ROBO2Q9HCK4 1378 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 ABCA8O94911 1581 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 MACROD2A1Z1Q3 448 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 AATFQ9NY61 560 aaKnown RBP eCLIP12.65□□□□□ -0.38
RGPD5-201ENST00000016946 GPAA1O43292 621 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 KIF5CO60282 957 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 KBTBD3Q8NAB2 608 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
RGPD5-201ENST00000016946 KDM5DQ9BY66 1539 aa12.65□□□□□ -0.39
RGPD5-201ENST00000016946 RXRAP19793 462 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 AK2P54819 239 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 N4BP3O15049 544 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
RGPD5-201ENST00000016946 PRKG1Q13976 671 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 ANKRD62A6NC57 917 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 SPAG5Q96R06 1193 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 B4E1Z4 1266 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 SPAG1Q07617 926 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 TNFAIP1Q13829 316 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 PHACTR2O75167 634 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 CTSWP56202 376 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 TRIM37O94972 964 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 DPY19L2Q6NUT2 758 aa12.64□□□□□ -0.39
RGPD5-201ENST00000016946 PSMA7O14818 248 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 SPTLC2O15270 562 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 GTF2IP78347 998 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 ISM2Q6H9L7 571 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 TTLL7Q6ZT98 887 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 CCDC172P0C7W6 258 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 SP4Q02446 784 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
RGPD5-201ENST00000016946 MFSD14BQ5SR56 506 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 RUFY3Q7L099 469 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 F13A1P00488 732 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 PCCAP05165 728 aaPredicted RBP12.63□□□□□ -0.39
RGPD5-201ENST00000016946 CCDC129Q6ZRS4 1044 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 MAGI3Q5TCQ9 1506 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 CRKLP46109 303 aaKnown RBP12.63□□□□□ -0.39
RGPD5-201ENST00000016946 ZRSR2Q15696 482 aaKnown RBP12.63□□□□□ -0.39
RGPD5-201ENST00000016946 MAPKAPK5Q8IW41 473 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 AATKQ6ZMQ8 1374 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 AOX1Q06278 1338 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 PNMA6EA0A0J9YXQ4 647 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
RGPD5-201ENST00000016946 SLC1A4P43007 532 aa12.62□□□□□ -0.39
RGPD5-201ENST00000016946 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
RGPD5-201ENST00000016946 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
RGPD5-201ENST00000016946 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
RGPD5-201ENST00000016946 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms