RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Map10Q8BJS7 891 aa22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Polr3dQ91WD1 398 aa22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Stag1Q9D3E6 1258 aa22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Col24a1Q30D77 1733 aa22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Ppp4r2Q0VGB7 417 aa22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Ltv1Q6NSQ7 470 aaKnown RBP22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Ddx31Q6NZQ2 687 aaKnown RBP22.77■■□□□ 1.24
Scn1b-203ENSMUST00000211945 Kifc2O08672 792 aa22.76■■□□□ 1.23
Scn1b-203ENSMUST00000211945 FliiQ9JJ28 1271 aa22.76■■□□□ 1.23
Scn1b-203ENSMUST00000211945 NynrinQ5DTZ0 1840 aa22.75■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Glt1d1A4FUP9 346 aa22.75■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Map9Q3TRR0 646 aa22.75■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Bmp2kQ91Z96 1138 aa22.75■■□□□ 1.23
Scn1b-203ENSMUST00000211945 CenppQ9CZ92 286 aa22.75■■□□□ 1.23
Scn1b-203ENSMUST00000211945 RarsQ9D0I9 660 aaKnown RBP22.75■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Gm3893E9Q1I1 302 aa22.74■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Psmd14O35593 310 aa22.74■■□□□ 1.23
Scn1b-203ENSMUST00000211945 NpeppsQ11011 920 aa22.74■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Krt40Q6IFX3 439 aa22.74■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Gm2163Q6PCY5 473 aa22.74■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Tmem179Q8BHH9 233 aa22.74■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Siah1aP61092 282 aa22.73■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Ifi207E9Q3L4 978 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 NpcdF8VQB8 469 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Edrf1Q6GQV7 1239 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Ccdc93Q7TQK5 629 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 NsmfQ99NF2 532 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Stk3Q9JI10 497 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Nkx1-2P42580 305 aa22.72■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Adam7O35227 789 aa22.71■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Eif6O55135 245 aa22.71■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Usp48Q3V0C5 1052 aa22.71■■□□□ 1.23
Scn1b-203ENSMUST00000211945 Mboat7Q8CHK3 473 aa22.71■■□□□ 1.23
Scn1b-203ENSMUST00000211945 CalcaP70160 136 aa22.7■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Pla2g4fQ50L41 855 aa22.7■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Prune1Q8BIW1 454 aa22.7■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Uba5Q8VE47 403 aa22.7■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Rbm6S4R1W5 1118 aaKnown RBP22.7■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Zbtb7aO88939 569 aaKnown RBP22.69■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Znf428Q8C1M2 176 aa22.69■■□□□ 1.22
Scn1b-203ENSMUST00000211945 MthfsQ9D110 203 aa22.69■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Col20a1Q923P0 1320 aa22.69■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Pdia3P27773 505 aaKnown RBP22.68■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Slc10a5Q5PT54 434 aa22.68■■□□□ 1.22
Scn1b-203ENSMUST00000211945 AsnsQ61024 561 aa22.68■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Q9D2X8 372 aa22.68■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Stk32bQ9JJX8 414 aa22.68■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Arid4aF8VPQ2 1261 aaKnown RBP22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Mmp14P53690 582 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Rps12P63323 132 aaKnown RBP22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Sept12Q9D451 317 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Ripk4Q9ERK0 786 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Nek4Q9Z1J2 792 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Cyp2d10P24456 504 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Mxd3Q80US8 206 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Cxcl11Q9JHH5 100 aa22.67■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Peak1Q69Z38 1735 aa22.66■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Npr3P70180 536 aa22.66■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Cfap69Q8BH53 942 aa22.66■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Rasgrp4Q8BTM9 673 aa22.66■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Pcdhb5Q91XZ5 792 aa22.66■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Pla2g12bQ99P27 195 aa22.66■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Anapc15-psA0A140T8L6 141 aa22.65■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Dcdc2bF7BCK0 340 aa22.65■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Tom1l2Q5SRX1 507 aa22.65■■□□□ 1.22
Scn1b-203ENSMUST00000211945 Esyt2Q3TZZ7 845 aa22.64■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Tbc1d9Q3UYK3 1264 aa22.64■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Pus3Q9JI38 481 aa22.64■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Zdbf2Q5SS00 2493 aaKnown RBP22.64■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Gtpbp6Q3U6U5 514 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 SfswapQ3USH5 945 aaKnown RBP22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Large2Q5XPT3 690 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Tm4sf1Q64302 202 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 1700018B08RikQ9DA83 213 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Appbp2Q9DAX9 585 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Jag1Q9QXX0 1218 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Epb41l3Q9WV92 929 aa22.63■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Ppfia1B2RXQ2 1266 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Gas1Q01721 343 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Cyp24a1Q64441 514 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Bms1Q6PGF5 1284 aaKnown RBP22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Olfm5Q8BU90 496 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Ppp6r3Q922D4 844 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Pappa2E9PZ87 1789 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Mdm2P23804 489 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Nucb1Q02819 459 aaKnown RBP22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 GmpsQ3THK7 693 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 SpidrQ8BGX7 933 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 ParnQ8VDG3 624 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 IcoslgQ9JHJ8 322 aa22.62■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Adgra3Q7TT36 1310 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 UtrnE9Q6R7 3430 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Krt24A1L317 512 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Frmd7A2AD83 703 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Cyp2d9P11714 504 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Ppp4cP97470 307 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Spata18Q0P557 537 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Tmed8Q3UHI4 326 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 Mb21d2Q8C525 428 aa22.61■■□□□ 1.21
Scn1b-203ENSMUST00000211945 NrapQ80XB4 1728 aa22.61■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms