RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Cnnm3Q32NY4 713 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nxf2Q4ZGD8 691 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Gm21985Q6P6P5 1106 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Slf2Q6P9P0 1278 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nap1l3Q794H2 544 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Pm20d1Q8C165 503 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ppp4r3bQ922R5 820 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Pes1Q9EQ61 584 aaKnown RBP12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Bin2D3Z6Q9 489 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Fkbp1aP26883 108 aaKnown RBP12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Hand2Q61039 217 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Esco1Q69Z69 843 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Zfp397Q7TNK4 527 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 E4f1Q8CCE9 783 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Chd1lQ9CXF7 900 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Myh1Q5SX40 1942 aa12.26□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Usp42B2RQC2 1324 aaKnown RBP12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ppfia3P60469 1194 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ggt6Q6PDE7 497 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Fam160b2Q80YR2 744 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Map10Q8BJS7 891 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Klc3Q91W40 508 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 MycbpQ9EQS3 103 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 FosbP13346 338 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Cct2P80314 535 aaKnown RBP12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nlrp9aQ66X03 949 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Olfml1Q8BSH2 233 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Pms1Q8K119 917 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Trim34aQ99PP6 485 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Med4Q9CQA5 270 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Igbp1bQ9QZ29 343 aa12.25□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nwd2Q6P5U7 1742 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Greb1lB9EJV3 1913 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Dctn1O08788 1281 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Tom1O88746 492 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Esyt1Q3U7R1 1092 aaKnown RBP12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Bsdc1Q80Y55 427 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Sptlc3Q8BG54 563 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Zscan22Q8BGS5 496 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Susd4Q8BH32 490 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Fam53cQ8BXQ8 393 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nup88Q8CEC0 753 aaKnown RBP12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Emilin1Q99K41 1017 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ankrd31A0A140LI88 1765 aa12.24□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Pde8bE9Q4S1 865 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Sf3b2Q3UJB0 878 aaKnown RBP12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 VeztQ3ZK22 780 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Oxsr1Q6P9R2 527 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Znf771Q8BJ90 317 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Spata32Q8C5V0 334 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Wdr24Q8CFJ9 790 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Kcnq3Q8K3F6 873 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Appbp2Q9DAX9 585 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Kcnq5Q9JK45 933 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Tbc1d8Q9Z1A9 1134 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Oas2E9Q9A9 742 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Cyp2d34L7N463 504 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 CalrP14211 416 aaKnown RBP12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Exosc10P56960 887 aaKnown RBP12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Anp32eP97822 260 aaKnown RBP12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Zkscan4Q5SZT6 480 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Edrf1Q6GQV7 1239 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ano1Q8BHY3 960 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ift57Q8BXG3 429 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Cwc15Q9JHS9 229 aaKnown RBP12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Golga5Q9QYE6 729 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Kndc1Q0KK55 1742 aa12.23□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Bicdl1A0JNT9 577 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Sept1P42209 366 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ccdc162pQ0VG85 912 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ifit1bl2Q3U687 466 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Erich4Q3UNU4 136 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Ubash3aQ3V3E1 624 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Slc38a10Q5I012 1090 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Kiaa1211Q5PR69 1207 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Fsd1Q7TPM6 496 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Eno4Q8C042 619 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 CrebrfQ8CDG5 640 aaKnown RBP12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Atad2Q8CDM1 1040 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Riok1Q922Q2 567 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Kat6bQ8BRB7 1872 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Mcm3P25206 812 aaKnown RBP12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Adcy5P84309 1262 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Limch1Q3UH68 1057 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Shisa4Q8CA71 197 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Otud6bQ8K2H2 294 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Serpina10Q8R121 448 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nop14Q8R3N1 860 aaKnown RBP12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 BrapQ99MP8 591 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Rai14Q9EP71 979 aaKnown RBP12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Plekho1Q9JIY0 408 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Irx5Q9JKQ4 484 aa12.22□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Fer1l6E0CZ42 1862 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Cyp2c23E9Q5K4 494 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Gm29094F6Q785 221 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Plbd2Q3TCN2 594 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Nxf7Q80SZ6 620 aaKnown RBP12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Tbc1d7Q9D0K0 293 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 MthfsQ9D110 203 aa12.21□□□□□ -0.45
Ptpre-208ENSMUST00000211788 Sept12Q9D451 317 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms