RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Stx12Q9ER00 274 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kdm3aQ6PCM1 1323 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zscan18E9PUD6 809 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gsta4P24472 222 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Sos2Q02384 1333 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Apol7eQ3UZ24 369 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fkbp5Q64378 456 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zc4h2Q68FG0 224 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Efcab14Q8BGQ6 484 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kif2bQ8C0N1 668 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Bicdl2Q8CHW5 507 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Slc52a2Q9D8F3 450 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ndufa8Q9DCJ5 172 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Taf7Q9R1C0 341 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm1043A0A140LJC2 1431 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm28043E0CXC2 719 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gadd45bP22339 160 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Pdia3P27773 505 aaKnown RBP10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 ErmnQ5EBJ4 281 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Retreg2Q6NS82 541 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Arhgap18Q8K0Q5 663 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Nup133Q8R0G9 1155 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Klc4Q9DBS5 619 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Osbpl5Q9ER64 874 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ankrd2Q9WV06 328 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zmynd8A2A484 1235 aaKnown RBP10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Serpini1O35684 410 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ncf2O70145 525 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Dnm1P39053 867 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ccdc129Q14B48 1034 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ift122Q6NWV3 1182 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Prc1Q99K43 603 aaKnown RBP10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Actn2Q9JI91 894 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 PaskQ8CEE6 1383 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 ZfaP23607 742 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Nub1P54729 614 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Dzip1lQ499E4 774 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Sun3Q5SS91 320 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 TmpoQ61033 693 aaKnown RBP10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ttc4Q8R3H9 386 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ssx2ipQ8VC66 615 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Q9D5Q8 446 aa10.19□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Atp6v0a2P15920 856 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ppp1r15aP17564 657 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Mtx1P47802 317 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cnnm2Q3TWN3 875 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Esyt2Q3TZZ7 845 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zbtb16Q3UQ17 673 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Asic1Q6NXK8 526 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Slc51bQ80WK2 128 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fam228aQ8CDW1 299 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cgref1Q8R1U2 281 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Smc6Q924W5 1097 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Slx4ipQ9D7Y9 413 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 PalmdQ9JHU2 551 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rlbp1Q9Z275 317 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm6588E9Q3K0 461 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 GnaqP21279 359 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Plcb3P51432 1234 aaKnown RBP10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Smarcad1Q04692 1021 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cep104Q80V31 926 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Bank1Q80VH0 783 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ankrd49Q8VE42 238 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Paip2bQ91W45 136 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Rrs1Q9CYH6 365 aaKnown RBP10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Krt71Q9R0H5 524 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Stat2Q9WVL2 923 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Mx2Q9WVP9 655 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tcerg1lQ3B807 590 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cage1Q5IR70 849 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Daam2Q80U19 1115 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Frat2Q8K025 231 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cwc25Q9DBF7 416 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ncapd2Q8K2Z4 1392 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm2030D3Z7C4 212 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 NeblQ0II04 452 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Map3k13Q1HKZ5 959 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Mum1l1Q4VA55 681 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fbxo41Q6NS60 873 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Stk38lQ7TSE6 464 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Clec16aQ80U30 1036 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Depdc1bQ8BH88 529 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Etf1Q8BWY3 437 aaKnown RBP10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Hgh1Q8C3I8 393 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tshz3Q8CGV9 1081 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 P3h4Q8K2B0 443 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Nup58Q8R332 587 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ncoa1P70365 1447 aa10.18□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fam207aP58468 219 aaKnown RBP10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 EsrrgP62509 458 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Q3TYL0 343 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ppp1r7Q3UM45 361 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cnga4Q3UW12 575 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ggnbp2Q5SV77 696 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ttc27Q8CD92 847 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Spata2Q8K004 515 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Card14Q99KF0 999 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Pck1Q9Z2V4 622 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Atp8b1Q148W0 1251 aa10.17□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Arhgef2Q60875 985 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms