RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Wbp1lQ8BGW2 348 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 CpvlQ9D3S9 478 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Krtap3-2Q9D638 99 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Krtap3-3Q9D7P0 99 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Nudt12Q9DCN1 462 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Foxo4Q9WVH3 505 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Myo5bP21271 1818 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Col3a1P08121 1464 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Znf609Q8BZ47 1413 aa10.92□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Col11a1Q61245 1804 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Cops6O88545 324 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Celf1P28659 486 aaKnown RBP10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ell2Q3UKU1 639 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Chpf2Q3UU43 768 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Q4VA45 678 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Fxr1Q61584 677 aaKnown RBP10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ddx31Q6NZQ2 687 aaKnown RBP10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Fbxo11Q7TPD1 930 aaKnown RBP10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 CrbnQ8C7D2 445 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Rnf208Q8K0W3 265 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Rem2Q8VEL9 341 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Kif2cQ922S8 721 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 GsdmaQ9EST1 446 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ltb4r2Q9JJL9 360 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 B3galt4Q9Z0F0 371 aa10.91□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Plekhh1Q80TI1 1356 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ttc21aQ8C0S4 1314 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Adgra2Q91ZV8 1336 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Col6a3E9PWQ3 3284 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Mmp14P53690 582 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Sh2d1b2Q45HK4 132 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Ddx49Q4FZF3 480 aaKnown RBP10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 BcanQ61361 883 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Eif4g2Q62448 906 aaKnown RBP10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Trnp1Q80ZI1 223 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Zbtb3Q91X45 518 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Hdac9Q99N13 588 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Slfn1Q9Z0I7 337 aa10.9□□□□□ -0.66
Pdlim5-209ENSMUST00000196908 Cacna1iE9Q7P2 2199 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Btn2a2A4QPC6 514 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Cyp19a1P28649 503 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Map4k4P97820 1233 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Itga6Q61739 1091 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Zbtb40Q6PCS8 1258 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Bms1Q6PGF5 1284 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Sulf1Q8K007 870 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Glrx3Q9CQM9 337 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Sytl4Q9R0Q1 673 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Fndc3c1Q6DFV6 1356 aa10.89□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Sbno2Q7TNB8 1349 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 1700006A11RikB9EHI3 544 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Hcn4O70507 1186 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Cbx2P30658 519 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Atoh1P48985 351 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Kcnh8P59111 1102 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Bend4P86174 541 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Csf2raQ00941 388 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Uspl1Q3ULM6 1089 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 PsapQ61207 557 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Senp5Q6NXL6 749 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Sez6lQ6P1D5 963 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Znf18Q810A1 556 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Ireb2Q811J3 963 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Fam83aQ8K2P2 436 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Tmem119Q8R138 280 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Supt16hQ920B9 1047 aa10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Prkrip1Q9CWV6 186 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Mbd3Q9Z2D8 285 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Ccdc88aQ5SNZ0 1873 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Myd88P22366 296 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Rbm27Q5SFM8 1060 aaKnown RBP10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Rasa3Q60790 834 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Il31raQ8K5B1 716 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 MyocdQ8VIM5 935 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Prkag2Q91WG5 566 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Golga2Q921M4 999 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Tgm5Q9D7I9 724 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Btbd19S4R1I0 287 aa10.87□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Sik3Q6P4S6 1311 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Nfxl1E9Q8I7 918 aaKnown RBP10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Usp17lbE9Q9U0 468 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Ralbp1Q62172 648 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Erc2Q6PH08 957 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Prpf40bQ80W14 870 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Ccdc30Q8BVF4 654 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 McamQ8R2Y2 648 aaKnown RBP10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Slc14a2Q8R4T9 930 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Ttc14Q9CSP9 761 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Tll2Q9WVM6 1012 aa10.86□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 EvplQ9D952 2035 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Mapk8ip3Q9ESN9 1337 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Rnf19bA2A7Q9 732 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Csrnp1P59054 583 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Q3TQI7 289 aaKnown RBP10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Liat1Q810M6 228 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Speer4f1Q9D5Q6 258 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Tmem79Q9D709 391 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Myo15bI7HPW8 3033 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Znf541Q0GGX2 1363 aa10.85□□□□□ -0.67
Pdlim5-209ENSMUST00000196908 Myh1Q5SX40 1942 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms