RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Ift57Q8BXG3 429 aa18.27■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Nlrp3Q8R4B8 1033 aa18.27■□□□□ 0.52
Sdc1-205ENSMUST00000171158 Dusp10Q9ESS0 483 aa18.27■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Kndc1Q0KK55 1742 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Stx1aO35526 288 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Alx1Q8C8B0 326 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 CrebrfQ8CDG5 640 aaKnown RBP18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Adam1bQ8R534 806 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Zbtb1Q91VL9 713 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Riok1Q922Q2 567 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Tcof1O08784 1320 aaKnown RBP18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Sptlc3Q8BG54 563 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 SdsQ8VBT2 327 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cnot6lQ8VEG6 555 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Nrbp1Q99J45 535 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cdc45Q9Z1X9 566 aa18.26■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Prl3d1P18121 224 aa18.25■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Tpcn2Q8BWC0 731 aa18.25■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Grpel1Q99LP6 217 aa18.25■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Ccer1Q9CQL2 403 aa18.25■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Telo2Q9DC40 840 aaKnown RBP18.25■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Foxo4Q9WVH3 505 aa18.25■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Fkbp1aP26883 108 aaKnown RBP18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Sept1P42209 366 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cep63Q3UPP8 700 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Fsd2Q8BZ52 692 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cfap44E9Q5M6 1843 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Pcdhb9E9Q5G2 828 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Pde4dQ01063 747 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Itga6Q61739 1091 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Pknox2Q8BG99 474 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Srek1Q8BZX4 494 aaKnown RBP18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Pcdhb22Q91XZ8 794 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Syt10Q9R0N4 523 aa18.24■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Gm973E9Q295 1059 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Pde8bE9Q4S1 865 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cdk4P30285 303 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Ano6Q6P9J9 911 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Sept12Q9D451 317 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Clic4Q9QYB1 253 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Pramel3A2AHA7 463 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Gm7903A2AWL1 463 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 AV320801A2AWL3 467 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Bin2D3Z6Q9 489 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Gm15023L7MUB4 467 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Ccng2O08918 344 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Tlcd1Q99JT6 247 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Odf2lQ9D478 642 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Setdb1O88974 1307 aa18.23■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cyp3a59D3Z2W7 503 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Plekhf1Q3TB82 279 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Slc38a10Q5I012 1090 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Zeb2Q9R0G7 1215 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 FAM186AQ9D9R9 1790 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Atp2b1G5E829 1220 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Trim34bJ3QNR8 485 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Sik1Q60670 779 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Cyp7a1Q64505 503 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Jmjd4Q8BFT6 427 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Dnaaf2Q8BPI1 814 aa18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Hnrnpul1Q8VDM6 859 aaKnown RBP18.22■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Gm20425E9Q035 978 aaKnown RBP18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Znf326O88291 580 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 SrprbP47758 269 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Plbd2Q3TCN2 594 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Acap3Q6NXL5 833 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Dhx40Q6PE54 779 aaKnown RBP18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Golph3lQ8R088 285 aaKnown RBP18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Stk38Q91VJ4 465 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Yeats4Q9CR11 227 aaKnown RBP18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Gm45140A0A0N4SUM8 220 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 Lipo1J3QME6 396 aa18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 RdxP26043 583 aaKnown RBP18.21■□□□□ 0.51
Sdc1-205ENSMUST00000171158 CpdO89001 1377 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Tpd52l1O54818 204 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Ano10Q8BH79 659 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Rbm42Q91V81 474 aaKnown RBP18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Lrrc59Q922Q8 307 aaKnown RBP18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Tbc1d7Q9D0K0 293 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Mei1Q9D4I2 1268 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Zbtb43Q9DAI4 467 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Fbxo3Q9DC63 480 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Tulp1Q9Z273 543 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Oas2E9Q9A9 742 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Prdm1Q60636 856 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Kcnk13Q8R1P5 405 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Hps3Q91VB4 1002 aa18.2■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Rgs12Q8CGE9 1381 aa18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Sptlc2P97363 560 aaKnown RBP18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Gm28047Q3US59 414 aa18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Ifi35Q9D8C4 286 aa18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Irx4Q9QY61 515 aa18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Myh2G3UW82 1942 aa18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Mast3Q3U214 1321 aa18.19■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Cyp26a1O55127 497 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Q8BZJ8 459 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Sil1Q9EPK6 465 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 4931408C20RikE9PWP9 1381 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Nme8Q715T0 586 aa18.18■□□□□ 0.5
Sdc1-205ENSMUST00000171158 Abtb2Q7TQI7 1024 aa18.18■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms