RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Tshz1Q5DTH5 1084 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 CoilQ5SU73 570 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Ccdc66Q6NS45 935 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Zfp397Q7TNK4 527 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Plcd1Q8R3B1 756 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Tceal9Q9DD24 104 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Zkscan5Q9Z1D8 819 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Col16a1Q8BLX7 1580 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Scn7aB1AYL1 1681 aa12.03□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Dhx8A2A4P0 1244 aaKnown RBP12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Cfap58B2RW38 873 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Cnnm3Q32NY4 713 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Rnf20Q5DTM8 973 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Cdca8Q8BHX3 289 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Ints4Q8CIM8 964 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Tmem134Q8R0J4 195 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Srgap1Q91Z69 1062 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Nfe2l3Q9WTM4 660 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Scn4aQ9ER60 1841 aa12.02□□□□□ -0.48
Pdlim5-204ENSMUST00000168967 Gpatch11Q3UFS4 262 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 EappQ5BU09 281 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Gsdma3Q5Y4Y6 464 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ubxn10Q8BG34 277 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ccz1Q8C1Y8 480 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Atf7Q8R0S1 413 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ubxn4Q8VCH8 506 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Zfp617Q91WM0 559 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Taf5lQ91WQ5 589 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 AdarQ99MU3 1178 aaKnown RBP12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 CenpqQ9CPQ5 267 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Echdc1Q9D9V3 322 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ndufa8Q9DCJ5 172 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Osbpl5Q9ER64 874 aa12.02□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Slit3Q9WVB4 1523 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Wnt7aP24383 349 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Apex1P28352 317 aaKnown RBP12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Kif2aP28740 705 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Tpm1P58771 284 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Sec1P97353 368 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Spryd7Q3TFQ1 196 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Dnaaf2Q8BPI1 814 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Kiaa0391Q8JZY4 584 aaKnown RBP12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Sh3bgrQ9WUZ7 214 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Hmg20bQ9Z104 317 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Abcc4E9Q236 1325 aa12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Eif3aP23116 1344 aaKnown RBP12.01□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Gm11563B1AQ90 168 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Qtrt2B8ZXI1 415 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Clec11aO88200 328 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Lins1Q3U1D0 764 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Chpf2Q3UU43 768 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Cep135Q6P5D4 1140 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Lrch3Q8BVU0 778 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Rhot2Q8JZN7 620 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Tlcd1Q99JT6 247 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Tubb4aQ9D6F9 444 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Krtap4-7Q9D732 168 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Sytl4Q9R0Q1 673 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Nup153E9Q3G8 1462 aaKnown RBP12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Pik3c2aQ61194 1686 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Rbm8a2A0A0N4SUH6 174 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Fbxl16A2RT62 479 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Mctp1E9PV86 951 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 TrdnE9Q9K5 693 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Bend3Q6PAL0 825 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ulbp1Q8HWA3 334 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Hyal3Q8VEI3 412 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Rbm8aQ9CWZ3 174 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ak2Q9WTP6 239 aa12□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Aox4Q3TYQ9 1336 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Map7d2A2AG50 781 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Tmem109Q3UBX0 243 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Fam228bQ497Q6 232 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Slc4a10Q5DTL9 1118 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Lrrc8aQ80WG5 810 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Ercc6lQ8BHK9 1240 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Fam212aQ9CX62 282 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Fam174aQ9D3L0 190 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Prpf40aQ9R1C7 953 aaKnown RBP11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Mon2Q80TL7 1715 aa11.99□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Map2P20357 1828 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Parp14Q2EMV9 1817 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 1700113H08RikE9Q9Q5 327 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Epb42P49222 691 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Csrnp1P59054 583 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 CgnP59242 1191 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Rps6kb1Q8BSK8 525 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Mtmr3Q8K296 1196 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Gtf3c5Q8R2T8 520 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Nlrp3Q8R4B8 1033 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Cdca7lQ922M5 438 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Hps4Q99KG7 671 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Arap3Q8R5G7 1538 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Abcc12Q80WJ6 1366 aa11.98□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Camta1A2A891 1682 aa11.97□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Slc4a9E9PUP3 929 aa11.97□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Card6E9PWH2 1175 aa11.97□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Pkp1P97350 728 aaKnown RBP11.97□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 RubcnlQ3TD16 648 aa11.97□□□□□ -0.49
Pdlim5-204ENSMUST00000168967 Cln3Q61124 438 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms